Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0841
(671 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 23 2.6
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 23 2.6
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 23 2.6
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 23 2.6
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 22 4.6
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 22 6.1
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 22 6.1
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 22 6.1
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 21 8.1
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 21 8.1
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 21 8.1
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 21 8.1
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 23.0 bits (47), Expect = 2.6
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = -1
Query: 128 SWSRRAFSKGRRGVTYVFENTDGTL 54
S++ + S + +TYV++N +GTL
Sbjct: 201 SFAIESISYEQTAITYVWKNDEGTL 225
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 23.0 bits (47), Expect = 2.6
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = -1
Query: 128 SWSRRAFSKGRRGVTYVFENTDGTL 54
S++ + S + +TYV++N +GTL
Sbjct: 201 SFAIESISYEQTAITYVWKNDEGTL 225
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 23.0 bits (47), Expect = 2.6
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = -1
Query: 128 SWSRRAFSKGRRGVTYVFENTDGTL 54
S++ + S + +TYV++N +GTL
Sbjct: 252 SFAIESISYEQTAITYVWKNDEGTL 276
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 23.0 bits (47), Expect = 2.6
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = -1
Query: 128 SWSRRAFSKGRRGVTYVFENTDGTL 54
S++ + S + +TYV++N +GTL
Sbjct: 201 SFAIESISYEQTAITYVWKNDEGTL 225
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.2 bits (45), Expect = 4.6
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 237 GEGPQELFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIE 353
GEG + LFE + L +I ++E+ D VL + IE
Sbjct: 167 GEGSKPLFEREEIKNVLTKINKIEEQ----DTVLVVNIE 201
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 21.8 bits (44), Expect = 6.1
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -2
Query: 589 LSLAEVLPLDTSRTTSTEW 533
LSL V+ LDT++ EW
Sbjct: 10 LSLVSVVLLDTTQEEKLEW 28
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 21.8 bits (44), Expect = 6.1
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = +2
Query: 470 EHPIIYCAPGLWQHID 517
E+ + C PG W H D
Sbjct: 482 EYTCMDCGPGKWPHED 497
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 21.8 bits (44), Expect = 6.1
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = +2
Query: 470 EHPIIYCAPGLWQHID 517
E+ + C PG W H D
Sbjct: 572 EYTCMDCGPGKWPHED 587
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 21.4 bits (43), Expect = 8.1
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = -1
Query: 365 LQEVLNLQTKHIIEFHLFFIQYSNTNQ 285
++ V N+ K + F L F+Q N N+
Sbjct: 42 IRPVQNMTEKVHVNFGLAFVQLINVNE 68
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.4 bits (43), Expect = 8.1
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +3
Query: 237 GEGPQELFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIE 353
GEG + LFE + L +I ++E D VL + IE
Sbjct: 156 GEGSKPLFEREEIKNVLTKINKIEEH----DTVLVVNIE 190
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.4 bits (43), Expect = 8.1
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +3
Query: 237 GEGPQELFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIE 353
GEG + LFE + L +I ++E D VL + IE
Sbjct: 167 GEGSKPLFEREEIKNVLTKINKIEEH----DTVLVVNIE 201
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.4 bits (43), Expect = 8.1
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +3
Query: 237 GEGPQELFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIE 353
GEG + LFE + L +I ++E D VL + IE
Sbjct: 156 GEGSKPLFEREEIKNVLTKINKIEEH----DTVLVVNIE 190
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,408
Number of Sequences: 438
Number of extensions: 3751
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20343105
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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