Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0840
         (698 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7RIF6 Cluster: Putative uncharacterized protein PY0366...    34   3.9  
UniRef50_A6LBV4 Cluster: Putative uncharacterized protein; n=1; ...    33   8.9  

>UniRef50_Q7RIF6 Cluster: Putative uncharacterized protein PY03667;
           n=7; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY03667 - Plasmodium yoelii yoelii
          Length = 1166

 Score = 33.9 bits (74), Expect = 3.9
 Identities = 21/73 (28%), Positives = 32/73 (43%)
 Frame = +1

Query: 376 FCIFTYSIFRIFAYNGKYLYCFMYIIFLNIEE*HNEF*LYKINKLE*ISEIVCL*RQISV 555
           F   T  +F  F Y  KY Y F  II++NI    +   LY  N ++   +   + R + +
Sbjct: 402 FNFVTKKLFNFFKYIVKYFYSFFLIIYMNIIHFFHIKKLYTFNDVKKEDKTKIITRSLEI 461

Query: 556 PLSSGLRNIGDIV 594
              S  +  GD V
Sbjct: 462 KYLSSKQQTGDNV 474


>UniRef50_A6LBV4 Cluster: Putative uncharacterized protein; n=1;
           Parabacteroides distasonis ATCC 8503|Rep: Putative
           uncharacterized protein - Parabacteroides distasonis
           (strain ATCC 8503 / DSM 20701 / NCTC11152)
          Length = 422

 Score = 32.7 bits (71), Expect = 8.9
 Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 4/40 (10%)
 Frame = +1

Query: 346 IECSQNSLVIFCIFTYSI-FRIFAYNGK---YLYCFMYII 453
           + C QN L+IFC F Y   F+ + ++ +   +L+ F+Y+I
Sbjct: 4   VRCYQNILIIFCFFVYFFPFKAYGFDPRLLVFLFFFIYMI 43


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 518,294,717
Number of Sequences: 1657284
Number of extensions: 8938522
Number of successful extensions: 14900
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 14438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14881
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)