Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0840
         (698 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY129449-1|AAM76191.1|  832|Drosophila melanogaster LD32019p pro...    29   4.6  
AE014296-1291|AAS65059.1| 1577|Drosophila melanogaster CG7526-PB...    29   4.6  
AE014296-1290|AAF50538.3| 1577|Drosophila melanogaster CG7526-PA...    29   4.6  

>AY129449-1|AAM76191.1|  832|Drosophila melanogaster LD32019p
           protein.
          Length = 832

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 15/51 (29%), Positives = 23/51 (45%)
 Frame = -1

Query: 665 TVRYSIPFRPVCHKNFWNIVI*EKTISPIFLNPDDKGTDICRYRHTISLIY 513
           T +  +P RP   K+ W   +  + + P F  P +  +   RYRH   L Y
Sbjct: 298 TSKAPVPLRPEVPKSLWVNQLQPRDLCPRFQAPRNGKSHCNRYRHKQKLFY 348


>AE014296-1291|AAS65059.1| 1577|Drosophila melanogaster CG7526-PB,
            isoform B protein.
          Length = 1577

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 15/51 (29%), Positives = 23/51 (45%)
 Frame = -1

Query: 665  TVRYSIPFRPVCHKNFWNIVI*EKTISPIFLNPDDKGTDICRYRHTISLIY 513
            T +  +P RP   K+ W   +  + + P F  P +  +   RYRH   L Y
Sbjct: 1043 TSKAPVPLRPEVPKSLWVNQLQPRDLCPRFQAPRNGKSHCNRYRHKQKLFY 1093


>AE014296-1290|AAF50538.3| 1577|Drosophila melanogaster CG7526-PA,
            isoform A protein.
          Length = 1577

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 15/51 (29%), Positives = 23/51 (45%)
 Frame = -1

Query: 665  TVRYSIPFRPVCHKNFWNIVI*EKTISPIFLNPDDKGTDICRYRHTISLIY 513
            T +  +P RP   K+ W   +  + + P F  P +  +   RYRH   L Y
Sbjct: 1043 TSKAPVPLRPEVPKSLWVNQLQPRDLCPRFQAPRNGKSHCNRYRHKQKLFY 1093


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,449,306
Number of Sequences: 53049
Number of extensions: 375335
Number of successful extensions: 613
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 613
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)