Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0839
         (690 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    26   0.25 
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    26   0.25 
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    24   1.0  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    23   1.8  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    23   1.8  
AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical pro...    23   2.4  

>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 26.2 bits (55), Expect = 0.25
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -3

Query: 436 IKIPKFIGSYYHTNNKLLHNLYVSLNTAF 350
           IK  K + SY+ T++  LHN+Y S+   +
Sbjct: 2   IKFSK-VKSYFTTHHDTLHNIYTSMKPVY 29


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 26.2 bits (55), Expect = 0.25
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -3

Query: 436 IKIPKFIGSYYHTNNKLLHNLYVSLNTAF 350
           IK  K + SY+ T++  LHN+Y S+   +
Sbjct: 2   IKFSK-VKSYFTTHHDTLHNIYTSMKPVY 29


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +1

Query: 64  PFPRFRFIYLYIYKNCSFKGIRYKFN 141
           PFP  +FI +  Y+N     ++ K+N
Sbjct: 172 PFPETQFIAVTAYQNEEVTALKIKYN 197


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -2

Query: 338 GLLSFICSFLKIKDCLNLTIGALCLLVCLSILK 240
           GLLS  CSF K K    +  GA+  L C+  L+
Sbjct: 26  GLLS--CSFPKKKLVYCIIFGAIATLTCIEGLR 56


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -2

Query: 338 GLLSFICSFLKIKDCLNLTIGALCLLVCLSILK 240
           GLLS  CSF K K    +  GA+  L C+  L+
Sbjct: 22  GLLS--CSFPKKKLVYCIIFGAIATLTCIEGLR 52


>AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical
           protein protein.
          Length = 148

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = +2

Query: 26  NPLYTKFYENRWSRFRDSDLYIYIYTR 106
           N LY+ +   R+ R R++D+Y + + +
Sbjct: 110 NSLYSSYEITRFIRSRETDVYTHNFVK 136


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,099
Number of Sequences: 336
Number of extensions: 3725
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)