Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0839
         (690 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U18130-1|AAC46512.1| 1047|Drosophila melanogaster masquerade pro...    30   2.6  
BT001597-1|AAN71352.1| 1047|Drosophila melanogaster RE29416p pro...    30   2.6  
AE014296-779|AAF47850.1| 1047|Drosophila melanogaster CG15002-PB...    30   2.6  

>U18130-1|AAC46512.1| 1047|Drosophila melanogaster masquerade
           protein.
          Length = 1047

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = -2

Query: 347 F*CGLLSFICSFLKIKDCLNLTIGALCLLVCLSILKIVMC 228
           F  GLL  I S    KDC  + +  L  L+C  +L  V C
Sbjct: 39  FLSGLLDTITSTADSKDCPGVCVHTLATLICYEVLDDVAC 78


>BT001597-1|AAN71352.1| 1047|Drosophila melanogaster RE29416p
           protein.
          Length = 1047

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = -2

Query: 347 F*CGLLSFICSFLKIKDCLNLTIGALCLLVCLSILKIVMC 228
           F  GLL  I S    KDC  + +  L  L+C  +L  V C
Sbjct: 39  FLSGLLDTITSTADSKDCPGVCVHTLATLICYEVLDDVAC 78


>AE014296-779|AAF47850.1| 1047|Drosophila melanogaster CG15002-PB
           protein.
          Length = 1047

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = -2

Query: 347 F*CGLLSFICSFLKIKDCLNLTIGALCLLVCLSILKIVMC 228
           F  GLL  I S    KDC  + +  L  L+C  +L  V C
Sbjct: 39  FLSGLLDTITSTADSKDCPGVCVHTLATLICYEVLDDVAC 78


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,070,011
Number of Sequences: 53049
Number of extensions: 540197
Number of successful extensions: 1125
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1124
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3005453946
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)