Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0836
         (695 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   1.8  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    23   1.8  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    21   9.6  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    21   9.6  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   9.6  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = -1

Query: 149 FYKYLLSAILSCITLFL*YLYMC-VVYVTI 63
           ++  LL+ ILS +T  +  +Y+C V Y TI
Sbjct: 555 YFMSLLNPILSNVTFVIDVVYVCDVCYSTI 584


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = -1

Query: 149 FYKYLLSAILSCITLFL*YLYMC-VVYVTI 63
           ++  LL+ ILS +T  +  +Y+C V Y TI
Sbjct: 280 YFMSLLNPILSNVTFVIDVVYVCDVCYSTI 309


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 559 DGDRQGRSKRPKG 597
           +G R  RSKRP G
Sbjct: 73  EGKRSKRSKRPNG 85


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 544 LLLRWVNELTAHWC 503
           L L+WV E   H+C
Sbjct: 167 LALKWVQENIIHFC 180


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +3

Query: 138 IFIKRGGETLDINWHLLGGIYLYTFS 215
           +F + G E LD++ +LLG + L + S
Sbjct: 339 LFRETGLERLDVSHNLLGKLPLTSLS 364


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,956
Number of Sequences: 336
Number of extensions: 3451
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)