BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= prgv0835 (693 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 05_03_0604 - 16132173-16132391,16132488-16132556,16132824-161328... 45 5e-05 07_01_1036 + 9021395-9021658,9024214-9024690 44 1e-04 08_02_1304 - 26008105-26009070 36 0.040 08_01_0027 - 195321-195932,197206-197415 35 0.053 08_02_1310 - 26037025-26038074 35 0.070 07_01_0011 - 81696-81892,83345-83621,83841-84189,84280-84644 35 0.070 08_02_1251 - 25592537-25593380,25593589-25593893 34 0.093 06_01_1008 - 7853089-7854147 34 0.093 08_01_0803 - 7771507-7772184,7772238-7772325,7772440-7772546 32 0.38 10_08_0082 + 14713989-14714046,14714109-14714953 31 0.66 03_02_0568 + 9514715-9514944,9515174-9515300,9515529-9515684,951... 31 0.66 07_03_1529 + 27491963-27492465,27493045-27493154,27493384-274935... 31 0.87 08_01_0797 + 7711772-7712869 31 1.1 08_01_0801 - 7750548-7751708 30 2.0 10_08_0073 + 14657400-14657696,14658168-14658229,14658241-14658886 29 4.6 10_08_0129 - 15025076-15025858,15025951-15026283 28 6.1 10_08_0122 - 14982676-14983043,14983957-14985145 28 6.1 04_04_0804 + 28171110-28171176,28171829-28172317,28172384-28173072 28 6.1 10_08_0119 - 14952786-14953931,14954709-14954831 28 8.1 >05_03_0604 - 16132173-16132391,16132488-16132556,16132824-16132898, 16132981-16133113,16133188-16133297,16133360-16133407, 16133657-16133983,16135006-16135233,16135360-16135689, 16135780-16136586 Length = 781 Score = 45.2 bits (102), Expect = 5e-05 Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 3/80 (3%) Frame = +1 Query: 274 AHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELAS 447 AHKL+LS+ S F +MF M + VF +DV A L+QFMY GE+ V EE+ Sbjct: 365 AHKLILSLWSMTFDKMFTNGMKESSASNVFFEDVPVEAFFLLIQFMYSGELKVDIEEITP 424 Query: 448 FISTAEQLQVK-GLTGXQNE 504 + L + G+T Q E Sbjct: 425 VLVELLLLSDQFGITALQFE 444 >07_01_1036 + 9021395-9021658,9024214-9024690 Length = 246 Score = 44.0 bits (99), Expect = 1e-04 Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 2/73 (2%) Frame = +1 Query: 274 AHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELAS 447 AH+++L+ SP F+ M + M ++ I+ + DVS+ LR + +MY E + ++ + Sbjct: 83 AHRVILASRSPVFRAMLENEMEESRSGIIKIYDVSYDVLRAFVHYMYTAEALLDEQMASD 142 Query: 448 FISTAEQLQVKGL 486 + AE+ +VK L Sbjct: 143 LLVLAEKYEVKNL 155 >08_02_1304 - 26008105-26009070 Length = 321 Score = 35.5 bits (78), Expect = 0.040 Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 2/69 (2%) Frame = +1 Query: 274 AHKLVLSVCSPYFQE--MFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELAS 447 AH+ VL+ SP F+ + M P V L+D+ + R LL F+Y +V Q E +S Sbjct: 167 AHRAVLAARSPVFRAELLGSMAEATMPCVTLRDIEPATFRALLHFVY---TDVLQIEGSS 223 Query: 448 FISTAEQLQ 474 ST + LQ Sbjct: 224 STSTTDLLQ 232 >08_01_0027 - 195321-195932,197206-197415 Length = 273 Score = 35.1 bits (77), Expect = 0.053 Identities = 22/94 (23%), Positives = 44/94 (46%), Gaps = 4/94 (4%) Frame = +1 Query: 268 LQAHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQ--E 435 L+AHK +L+ CSP F+ MF + + + + D+ + L+ F+Y G + + Q + Sbjct: 119 LKAHKAILASCSPVFESMFLHDLKEKESSTININDMCLESCSALIGFIY-GTIKLDQFWK 177 Query: 436 ELASFISTAEQLQVKGLTGXQNEEIPRHPNQSRL 537 S ++ A + + + E + N S + Sbjct: 178 HRLSLLAAANKYSISDIKDCCEESLLEDINSSNV 211 >08_02_1310 - 26037025-26038074 Length = 349 Score = 34.7 bits (76), Expect = 0.070 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 2/62 (3%) Frame = +1 Query: 271 QAHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELA 444 +AH+ VL+ SP F+ M P V L+D+ +A R +L F+Y + +ELA Sbjct: 191 RAHRAVLAARSPVFKAALFGSMAEATAPSVALRDMDPAAFRAVLHFIYTDALPDDIDELA 250 Query: 445 SF 450 F Sbjct: 251 GF 252 >07_01_0011 - 81696-81892,83345-83621,83841-84189,84280-84644 Length = 395 Score = 34.7 bits (76), Expect = 0.070 Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 3/67 (4%) Frame = +1 Query: 268 LQAHKLVLSVCSPYFQEMF---KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEE 438 +QAHK +L+ SP F+ F NP H ++ ++DV + ++ F+Y E+ E Sbjct: 197 VQAHKWILAARSPVFKAQFFGPIGNPDLHTVI-VEDVEPLVFKAMVNFIYSDEL-PSIHE 254 Query: 439 LASFIST 459 LA +ST Sbjct: 255 LAGSVST 261 >08_02_1251 - 25592537-25593380,25593589-25593893 Length = 382 Score = 34.3 bits (75), Expect = 0.093 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Frame = +1 Query: 274 AHKLVLSVCSPYFQEMFKMNPTQHPI--VFLKDVSHSALRDLLQFMYQGE 417 AH+ +L+VCSP F+ + + + + L D+ + LL FMY G+ Sbjct: 237 AHRALLAVCSPVFKALLLSSTAEAAACSITLNDIKPAMFEALLHFMYTGD 286 >06_01_1008 - 7853089-7854147 Length = 352 Score = 34.3 bits (75), Expect = 0.093 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%) Frame = +1 Query: 274 AHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMYQG 414 AHK++L+ SP F F M + V +KD+ S + +L F+Y G Sbjct: 190 AHKIILAARSPVFMAEFFGPMKESSSQCVEIKDIEASVFKAMLHFIYTG 238 >08_01_0803 - 7771507-7772184,7772238-7772325,7772440-7772546 Length = 290 Score = 32.3 bits (70), Expect = 0.38 Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 2/53 (3%) Frame = +1 Query: 274 AHKLVLSVCSPYFQ-EMF-KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNV 426 AHK+VL++ SP F+ E+F M ++ +KD+ + LL F+Y +++ Sbjct: 132 AHKVVLAMRSPVFKAELFGPMREAGAQVLPIKDIQPDVFKALLHFIYTDSLSI 184 >10_08_0082 + 14713989-14714046,14714109-14714953 Length = 300 Score = 31.5 bits (68), Expect = 0.66 Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 7/91 (7%) Frame = +1 Query: 268 LQAHKLVLSVCSPYFQE----MFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQE 435 L AH+ VL+ SP F+ + K T V ++D+ + LL+FMY + +E Sbjct: 141 LAAHRCVLAARSPVFKAELYGLMKEGGTAAGAVHIEDIEPRVFKVLLRFMYTDSLPEMEE 200 Query: 436 E---LASFISTAEQLQVKGLTGXQNEEIPRH 519 E + A++ ++ L E++ RH Sbjct: 201 EDVMCQHLLVAADRYNLERLKLICEEKLCRH 231 >03_02_0568 + 9514715-9514944,9515174-9515300,9515529-9515684, 9515765-9516102,9516191-9516329,9517083-9517152, 9517201-9517307,9517387-9517437,9517549-9517660, 9517783-9517869,9517958-9518133,9518479-9518586, 9518654-9518812,9518888-9518971,9519053-9519258, 9519565-9519666,9519768-9519877,9519963-9520114, 9520380-9520548,9520841-9520878,9521963-9522571, 9523314-9523784,9523786-9523871,9524396-9524906, 9525388-9525412,9526001-9526051,9526228-9526301, 9526412-9526534,9526667-9526738,9526924-9527020, 9527174-9527283 Length = 1649 Score = 31.5 bits (68), Expect = 0.66 Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 2/88 (2%) Frame = +1 Query: 316 EMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQLQVKGLTGX 495 +MF ++P++ P F + S S +RD Q+ + N++ + + Q + LTG Sbjct: 1073 DMFLVDPSESPQDFAANTSSSGVRDDRQWCVLEQANLQGYD----SDQPRRRQARRLTG- 1127 Query: 496 QNEEIPRHPNQ--SRLRGQAPGRHNKDN 573 +PR P + R + P RH+K+N Sbjct: 1128 ----LPRRPRRRGRRWGAKMPQRHSKNN 1151 >07_03_1529 + 27491963-27492465,27493045-27493154,27493384-27493510, 27494082-27494430,27494975-27495251,27496236-27496333, 27498090-27498214,27498270-27498326,27498328-27498370, 27498581-27498667,27498802-27498882,27499735-27499901, 27499987-27500098,27500188-27500390,27500473-27500607, 27501106-27501205 Length = 857 Score = 31.1 bits (67), Expect = 0.87 Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 2/51 (3%) Frame = +1 Query: 274 AHKLVLSVCSPYFQ-EMF-KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEV 420 AHK+VL+ SP F+ ++F M + ++D+ S + LL FMY E+ Sbjct: 324 AHKVVLAARSPVFRAQLFGPMKDKNMKRITIEDMEASVFKALLHFMYWDEL 374 >08_01_0797 + 7711772-7712869 Length = 365 Score = 30.7 bits (66), Expect = 1.1 Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 2/47 (4%) Frame = +1 Query: 274 AHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMY 408 AHKLVL+ SP F+ F +M + +KD+ S R LL F+Y Sbjct: 205 AHKLVLAARSPVFKAEFYGEMIERGTFSIDIKDMQPSVFRALLHFIY 251 >08_01_0801 - 7750548-7751708 Length = 386 Score = 29.9 bits (64), Expect = 2.0 Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 3/53 (5%) Frame = +1 Query: 277 HKLVLSVCSPYFQ-EMFKM--NPTQHPIVFLKDVSHSALRDLLQFMYQGEVNV 426 HKLVL++ SP F+ E+ + P PI + D+ + R LLQF+Y + V Sbjct: 215 HKLVLAMRSPVFKAELCGLLREPGTQPITIV-DMQPAVFRALLQFIYTDQFPV 266 >10_08_0073 + 14657400-14657696,14658168-14658229,14658241-14658886 Length = 334 Score = 28.7 bits (61), Expect = 4.6 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%) Frame = +1 Query: 274 AHKLVLSVCSPYFQ-EMF--KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEE 438 AH+ VL+ SP F E+F + + +V + D+ + LL+FMY + +EE Sbjct: 174 AHRCVLAAQSPVFSAELFGPMKDSDRAGVVRIDDMEAQVFKALLRFMYTDSLPEMEEE 231 >10_08_0129 - 15025076-15025858,15025951-15026283 Length = 371 Score = 28.3 bits (60), Expect = 6.1 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 5/63 (7%) Frame = +1 Query: 274 AHKLVLSVCSPYF-QEMF---KMNPTQHPIVFLKDVSHSALRDLLQFMYQGE-VNVKQEE 438 AH+LVL+V SP F E F K + ++ + D+ + LL F+Y + + QEE Sbjct: 180 AHRLVLAVRSPVFVAEHFGPMKEGVNVNDVIEINDMDAQVFKALLNFIYTDTLLEMDQEE 239 Query: 439 LAS 447 A+ Sbjct: 240 DAT 242 >10_08_0122 - 14982676-14983043,14983957-14985145 Length = 518 Score = 28.3 bits (60), Expect = 6.1 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 5/63 (7%) Frame = +1 Query: 274 AHKLVLSVCSPYF-QEMF---KMNPTQHPIVFLKDVSHSALRDLLQFMYQGE-VNVKQEE 438 AH+LVL+V SP F E F K + ++ + D+ + LL F+Y + + QEE Sbjct: 208 AHRLVLAVRSPVFVAEHFGPMKEGVNVNDVIEINDMDAQVFKALLNFIYTDTLLEMDQEE 267 Query: 439 LAS 447 A+ Sbjct: 268 DAT 270 >04_04_0804 + 28171110-28171176,28171829-28172317,28172384-28173072 Length = 414 Score = 28.3 bits (60), Expect = 6.1 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Frame = +1 Query: 298 CSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVN-VKQEEL 441 C P + F T++P+VFL+ + + DLLQ + V+ K+ EL Sbjct: 253 CEPRKEIFFTERNTENPLVFLRFLVSTPWGDLLQIKFSRRVHRTKRLEL 301 >10_08_0119 - 14952786-14953931,14954709-14954831 Length = 422 Score = 27.9 bits (59), Expect = 8.1 Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 2/47 (4%) Frame = +1 Query: 274 AHKLVLSVCSPYFQ-EMFK-MNPTQHPIVFLKDVSHSALRDLLQFMY 408 AH+LVL+ SP F+ E+FK M ++ + ++ + LL F+Y Sbjct: 262 AHRLVLAARSPVFKAELFKPMEEGTTDVIKIDNMDAQVFKALLVFIY 308 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,910,145 Number of Sequences: 37544 Number of extensions: 296308 Number of successful extensions: 707 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 692 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 704 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1768474200 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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