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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0835
         (693 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0604 - 16132173-16132391,16132488-16132556,16132824-161328...    45   5e-05
07_01_1036 + 9021395-9021658,9024214-9024690                           44   1e-04
08_02_1304 - 26008105-26009070                                         36   0.040
08_01_0027 - 195321-195932,197206-197415                               35   0.053
08_02_1310 - 26037025-26038074                                         35   0.070
07_01_0011 - 81696-81892,83345-83621,83841-84189,84280-84644           35   0.070
08_02_1251 - 25592537-25593380,25593589-25593893                       34   0.093
06_01_1008 - 7853089-7854147                                           34   0.093
08_01_0803 - 7771507-7772184,7772238-7772325,7772440-7772546           32   0.38 
10_08_0082 + 14713989-14714046,14714109-14714953                       31   0.66 
03_02_0568 + 9514715-9514944,9515174-9515300,9515529-9515684,951...    31   0.66 
07_03_1529 + 27491963-27492465,27493045-27493154,27493384-274935...    31   0.87 
08_01_0797 + 7711772-7712869                                           31   1.1  
08_01_0801 - 7750548-7751708                                           30   2.0  
10_08_0073 + 14657400-14657696,14658168-14658229,14658241-14658886     29   4.6  
10_08_0129 - 15025076-15025858,15025951-15026283                       28   6.1  
10_08_0122 - 14982676-14983043,14983957-14985145                       28   6.1  
04_04_0804 + 28171110-28171176,28171829-28172317,28172384-28173072     28   6.1  
10_08_0119 - 14952786-14953931,14954709-14954831                       28   8.1  

>05_03_0604 -
           16132173-16132391,16132488-16132556,16132824-16132898,
           16132981-16133113,16133188-16133297,16133360-16133407,
           16133657-16133983,16135006-16135233,16135360-16135689,
           16135780-16136586
          Length = 781

 Score = 45.2 bits (102), Expect = 5e-05
 Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
 Frame = +1

Query: 274 AHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELAS 447
           AHKL+LS+ S  F +MF   M  +    VF +DV   A   L+QFMY GE+ V  EE+  
Sbjct: 365 AHKLILSLWSMTFDKMFTNGMKESSASNVFFEDVPVEAFFLLIQFMYSGELKVDIEEITP 424

Query: 448 FISTAEQLQVK-GLTGXQNE 504
            +     L  + G+T  Q E
Sbjct: 425 VLVELLLLSDQFGITALQFE 444


>07_01_1036 + 9021395-9021658,9024214-9024690
          Length = 246

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
 Frame = +1

Query: 274 AHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELAS 447
           AH+++L+  SP F+ M +  M  ++  I+ + DVS+  LR  + +MY  E  + ++  + 
Sbjct: 83  AHRVILASRSPVFRAMLENEMEESRSGIIKIYDVSYDVLRAFVHYMYTAEALLDEQMASD 142

Query: 448 FISTAEQLQVKGL 486
            +  AE+ +VK L
Sbjct: 143 LLVLAEKYEVKNL 155


>08_02_1304 - 26008105-26009070
          Length = 321

 Score = 35.5 bits (78), Expect = 0.040
 Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
 Frame = +1

Query: 274 AHKLVLSVCSPYFQE--MFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELAS 447
           AH+ VL+  SP F+   +  M     P V L+D+  +  R LL F+Y    +V Q E +S
Sbjct: 167 AHRAVLAARSPVFRAELLGSMAEATMPCVTLRDIEPATFRALLHFVY---TDVLQIEGSS 223

Query: 448 FISTAEQLQ 474
             ST + LQ
Sbjct: 224 STSTTDLLQ 232


>08_01_0027 - 195321-195932,197206-197415
          Length = 273

 Score = 35.1 bits (77), Expect = 0.053
 Identities = 22/94 (23%), Positives = 44/94 (46%), Gaps = 4/94 (4%)
 Frame = +1

Query: 268 LQAHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQ--E 435
           L+AHK +L+ CSP F+ MF   +   +   + + D+   +   L+ F+Y G + + Q  +
Sbjct: 119 LKAHKAILASCSPVFESMFLHDLKEKESSTININDMCLESCSALIGFIY-GTIKLDQFWK 177

Query: 436 ELASFISTAEQLQVKGLTGXQNEEIPRHPNQSRL 537
              S ++ A +  +  +     E +    N S +
Sbjct: 178 HRLSLLAAANKYSISDIKDCCEESLLEDINSSNV 211


>08_02_1310 - 26037025-26038074
          Length = 349

 Score = 34.7 bits (76), Expect = 0.070
 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
 Frame = +1

Query: 271 QAHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELA 444
           +AH+ VL+  SP F+      M     P V L+D+  +A R +L F+Y   +    +ELA
Sbjct: 191 RAHRAVLAARSPVFKAALFGSMAEATAPSVALRDMDPAAFRAVLHFIYTDALPDDIDELA 250

Query: 445 SF 450
            F
Sbjct: 251 GF 252


>07_01_0011 - 81696-81892,83345-83621,83841-84189,84280-84644
          Length = 395

 Score = 34.7 bits (76), Expect = 0.070
 Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
 Frame = +1

Query: 268 LQAHKLVLSVCSPYFQEMF---KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEE 438
           +QAHK +L+  SP F+  F     NP  H ++ ++DV     + ++ F+Y  E+     E
Sbjct: 197 VQAHKWILAARSPVFKAQFFGPIGNPDLHTVI-VEDVEPLVFKAMVNFIYSDEL-PSIHE 254

Query: 439 LASFIST 459
           LA  +ST
Sbjct: 255 LAGSVST 261


>08_02_1251 - 25592537-25593380,25593589-25593893
          Length = 382

 Score = 34.3 bits (75), Expect = 0.093
 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
 Frame = +1

Query: 274 AHKLVLSVCSPYFQEMFKMNPTQHPI--VFLKDVSHSALRDLLQFMYQGE 417
           AH+ +L+VCSP F+ +   +  +     + L D+  +    LL FMY G+
Sbjct: 237 AHRALLAVCSPVFKALLLSSTAEAAACSITLNDIKPAMFEALLHFMYTGD 286


>06_01_1008 - 7853089-7854147
          Length = 352

 Score = 34.3 bits (75), Expect = 0.093
 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
 Frame = +1

Query: 274 AHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMYQG 414
           AHK++L+  SP F   F   M  +    V +KD+  S  + +L F+Y G
Sbjct: 190 AHKIILAARSPVFMAEFFGPMKESSSQCVEIKDIEASVFKAMLHFIYTG 238


>08_01_0803 - 7771507-7772184,7772238-7772325,7772440-7772546
          Length = 290

 Score = 32.3 bits (70), Expect = 0.38
 Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
 Frame = +1

Query: 274 AHKLVLSVCSPYFQ-EMF-KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNV 426
           AHK+VL++ SP F+ E+F  M      ++ +KD+     + LL F+Y   +++
Sbjct: 132 AHKVVLAMRSPVFKAELFGPMREAGAQVLPIKDIQPDVFKALLHFIYTDSLSI 184


>10_08_0082 + 14713989-14714046,14714109-14714953
          Length = 300

 Score = 31.5 bits (68), Expect = 0.66
 Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
 Frame = +1

Query: 268 LQAHKLVLSVCSPYFQE----MFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQE 435
           L AH+ VL+  SP F+     + K   T    V ++D+     + LL+FMY   +   +E
Sbjct: 141 LAAHRCVLAARSPVFKAELYGLMKEGGTAAGAVHIEDIEPRVFKVLLRFMYTDSLPEMEE 200

Query: 436 E---LASFISTAEQLQVKGLTGXQNEEIPRH 519
           E       +  A++  ++ L     E++ RH
Sbjct: 201 EDVMCQHLLVAADRYNLERLKLICEEKLCRH 231


>03_02_0568 + 9514715-9514944,9515174-9515300,9515529-9515684,
            9515765-9516102,9516191-9516329,9517083-9517152,
            9517201-9517307,9517387-9517437,9517549-9517660,
            9517783-9517869,9517958-9518133,9518479-9518586,
            9518654-9518812,9518888-9518971,9519053-9519258,
            9519565-9519666,9519768-9519877,9519963-9520114,
            9520380-9520548,9520841-9520878,9521963-9522571,
            9523314-9523784,9523786-9523871,9524396-9524906,
            9525388-9525412,9526001-9526051,9526228-9526301,
            9526412-9526534,9526667-9526738,9526924-9527020,
            9527174-9527283
          Length = 1649

 Score = 31.5 bits (68), Expect = 0.66
 Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
 Frame = +1

Query: 316  EMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQLQVKGLTGX 495
            +MF ++P++ P  F  + S S +RD  Q+    + N++  +         + Q + LTG 
Sbjct: 1073 DMFLVDPSESPQDFAANTSSSGVRDDRQWCVLEQANLQGYD----SDQPRRRQARRLTG- 1127

Query: 496  QNEEIPRHPNQ--SRLRGQAPGRHNKDN 573
                +PR P +   R   + P RH+K+N
Sbjct: 1128 ----LPRRPRRRGRRWGAKMPQRHSKNN 1151


>07_03_1529 +
           27491963-27492465,27493045-27493154,27493384-27493510,
           27494082-27494430,27494975-27495251,27496236-27496333,
           27498090-27498214,27498270-27498326,27498328-27498370,
           27498581-27498667,27498802-27498882,27499735-27499901,
           27499987-27500098,27500188-27500390,27500473-27500607,
           27501106-27501205
          Length = 857

 Score = 31.1 bits (67), Expect = 0.87
 Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
 Frame = +1

Query: 274 AHKLVLSVCSPYFQ-EMF-KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEV 420
           AHK+VL+  SP F+ ++F  M       + ++D+  S  + LL FMY  E+
Sbjct: 324 AHKVVLAARSPVFRAQLFGPMKDKNMKRITIEDMEASVFKALLHFMYWDEL 374


>08_01_0797 + 7711772-7712869
          Length = 365

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
 Frame = +1

Query: 274 AHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMY 408
           AHKLVL+  SP F+  F  +M       + +KD+  S  R LL F+Y
Sbjct: 205 AHKLVLAARSPVFKAEFYGEMIERGTFSIDIKDMQPSVFRALLHFIY 251


>08_01_0801 - 7750548-7751708
          Length = 386

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
 Frame = +1

Query: 277 HKLVLSVCSPYFQ-EMFKM--NPTQHPIVFLKDVSHSALRDLLQFMYQGEVNV 426
           HKLVL++ SP F+ E+  +   P   PI  + D+  +  R LLQF+Y  +  V
Sbjct: 215 HKLVLAMRSPVFKAELCGLLREPGTQPITIV-DMQPAVFRALLQFIYTDQFPV 266


>10_08_0073 + 14657400-14657696,14658168-14658229,14658241-14658886
          Length = 334

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
 Frame = +1

Query: 274 AHKLVLSVCSPYFQ-EMF--KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEE 438
           AH+ VL+  SP F  E+F    +  +  +V + D+     + LL+FMY   +   +EE
Sbjct: 174 AHRCVLAAQSPVFSAELFGPMKDSDRAGVVRIDDMEAQVFKALLRFMYTDSLPEMEEE 231


>10_08_0129 - 15025076-15025858,15025951-15026283
          Length = 371

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
 Frame = +1

Query: 274 AHKLVLSVCSPYF-QEMF---KMNPTQHPIVFLKDVSHSALRDLLQFMYQGE-VNVKQEE 438
           AH+LVL+V SP F  E F   K     + ++ + D+     + LL F+Y    + + QEE
Sbjct: 180 AHRLVLAVRSPVFVAEHFGPMKEGVNVNDVIEINDMDAQVFKALLNFIYTDTLLEMDQEE 239

Query: 439 LAS 447
            A+
Sbjct: 240 DAT 242


>10_08_0122 - 14982676-14983043,14983957-14985145
          Length = 518

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
 Frame = +1

Query: 274 AHKLVLSVCSPYF-QEMF---KMNPTQHPIVFLKDVSHSALRDLLQFMYQGE-VNVKQEE 438
           AH+LVL+V SP F  E F   K     + ++ + D+     + LL F+Y    + + QEE
Sbjct: 208 AHRLVLAVRSPVFVAEHFGPMKEGVNVNDVIEINDMDAQVFKALLNFIYTDTLLEMDQEE 267

Query: 439 LAS 447
            A+
Sbjct: 268 DAT 270


>04_04_0804 + 28171110-28171176,28171829-28172317,28172384-28173072
          Length = 414

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = +1

Query: 298 CSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVN-VKQEEL 441
           C P  +  F    T++P+VFL+ +  +   DLLQ  +   V+  K+ EL
Sbjct: 253 CEPRKEIFFTERNTENPLVFLRFLVSTPWGDLLQIKFSRRVHRTKRLEL 301


>10_08_0119 - 14952786-14953931,14954709-14954831
          Length = 422

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
 Frame = +1

Query: 274 AHKLVLSVCSPYFQ-EMFK-MNPTQHPIVFLKDVSHSALRDLLQFMY 408
           AH+LVL+  SP F+ E+FK M      ++ + ++     + LL F+Y
Sbjct: 262 AHRLVLAARSPVFKAELFKPMEEGTTDVIKIDNMDAQVFKALLVFIY 308


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,910,145
Number of Sequences: 37544
Number of extensions: 296308
Number of successful extensions: 707
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 692
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 704
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1768474200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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