Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0834
(694 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q55BQ0 Cluster: Putative uncharacterized protein; n=1; ... 35 1.6
UniRef50_Q9G859 Cluster: Haem lyase; n=1; Malawimonas jakobiform... 34 2.9
UniRef50_Q383Z6 Cluster: Helicase-like protein; n=2; Trypanosoma... 34 2.9
UniRef50_Q5ASJ4 Cluster: Putative uncharacterized protein; n=1; ... 34 3.8
UniRef50_Q10J35 Cluster: Retrotransposon protein, putative, Ty1-... 33 5.0
UniRef50_Q5AGI5 Cluster: Putative uncharacterized protein; n=2; ... 33 5.0
UniRef50_Q33563 Cluster: EATRO 164 kinetoplast; n=1; Trypanosoma... 33 8.8
UniRef50_Q5A659 Cluster: Putative uncharacterized protein; n=1; ... 33 8.8
>UniRef50_Q55BQ0 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 165
Score = 35.1 bits (77), Expect = 1.6
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +1
Query: 541 LLFLTFFAIPFIFNQT*IVYFTWNVYRTFFVFLVFYTIFLYFCF 672
L+F+ FF I F F I +F + + FF F +F IF +F F
Sbjct: 13 LIFIIFFFIIFFFIFFPIFFFIFFFFFIFFFFFIFIFIFFFFFF 56
>UniRef50_Q9G859 Cluster: Haem lyase; n=1; Malawimonas
jakobiformis|Rep: Haem lyase - Malawimonas jakobiformis
Length = 616
Score = 34.3 bits (75), Expect = 2.9
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +1
Query: 532 YPFLLFLTFFAIPFIFNQT*IVYFTWNVY--RTFFVFLVFYTIF 657
+ F+L + F I FIF I+Y VY F +F + YTIF
Sbjct: 93 WSFILIVLTFLIIFIFRNLSIIYLYKTVYIQNVFIIFFIIYTIF 136
>UniRef50_Q383Z6 Cluster: Helicase-like protein; n=2;
Trypanosoma|Rep: Helicase-like protein - Trypanosoma
brucei
Length = 1009
Score = 34.3 bits (75), Expect = 2.9
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = -2
Query: 408 LIKGPSTFVLKPNRNVPQKNRNGGNSFPRSK 316
+I+ PS FVL + +P+KNRNG +S P S+
Sbjct: 563 IIQKPSAFVLSISDPLPEKNRNGQDSVPSSE 593
>UniRef50_Q5ASJ4 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 182
Score = 33.9 bits (74), Expect = 3.8
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +1
Query: 538 FLLFLTFFAIPFIFNQT*IVYFTWNVYRTFFVFLVFYTIFLYFCFCSAFL 687
FL FL F + +YF + +Y +F++ +++ FLYF + FL
Sbjct: 32 FLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFL 81
Score = 33.9 bits (74), Expect = 3.8
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +1
Query: 538 FLLFLTFFAIPFIFNQT*IVYFTWNVYRTFFVFLVFYTIFLYFCFCSAFL 687
FL FL F + +YF + +Y +F++ +++ FLYF + FL
Sbjct: 35 FLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFL 84
Score = 33.9 bits (74), Expect = 3.8
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +1
Query: 538 FLLFLTFFAIPFIFNQT*IVYFTWNVYRTFFVFLVFYTIFLYFCFCSAFL 687
FL FL F + +YF + +Y +F++ +++ FLYF + FL
Sbjct: 38 FLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFL 87
Score = 33.9 bits (74), Expect = 3.8
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +1
Query: 538 FLLFLTFFAIPFIFNQT*IVYFTWNVYRTFFVFLVFYTIFLYFCFCSAFL 687
FL FL F + +YF + +Y +F++ +++ FLYF + FL
Sbjct: 41 FLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFL 90
Score = 33.9 bits (74), Expect = 3.8
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +1
Query: 538 FLLFLTFFAIPFIFNQT*IVYFTWNVYRTFFVFLVFYTIFLYFCFCSAFL 687
FL FL F + +YF + +Y +F++ +++ FLYF + FL
Sbjct: 44 FLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFL 93
Score = 33.9 bits (74), Expect = 3.8
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +1
Query: 538 FLLFLTFFAIPFIFNQT*IVYFTWNVYRTFFVFLVFYTIFLYFCFCSAFL 687
FL FL F + +YF + +Y +F++ +++ FLYF + FL
Sbjct: 47 FLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFL 96
Score = 33.9 bits (74), Expect = 3.8
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +1
Query: 538 FLLFLTFFAIPFIFNQT*IVYFTWNVYRTFFVFLVFYTIFLYFCFCSAFL 687
FL FL F + +YF + +Y +F++ +++ FLYF + FL
Sbjct: 50 FLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFL 99
Score = 33.9 bits (74), Expect = 3.8
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +1
Query: 538 FLLFLTFFAIPFIFNQT*IVYFTWNVYRTFFVFLVFYTIFLYFCFCSAFL 687
FL FL F + +YF + +Y +F++ +++ FLYF + FL
Sbjct: 53 FLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFL 102
Score = 33.9 bits (74), Expect = 3.8
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +1
Query: 538 FLLFLTFFAIPFIFNQT*IVYFTWNVYRTFFVFLVFYTIFLYFCFCSAFL 687
FL FL F + +YF + +Y +F++ +++ FLYF + FL
Sbjct: 56 FLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFL 105
Score = 33.9 bits (74), Expect = 3.8
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +1
Query: 538 FLLFLTFFAIPFIFNQT*IVYFTWNVYRTFFVFLVFYTIFLYFCFCSAFL 687
FL FL F + +YF + +Y +F++ +++ FLYF + FL
Sbjct: 59 FLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFL 108
Score = 33.9 bits (74), Expect = 3.8
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +1
Query: 538 FLLFLTFFAIPFIFNQT*IVYFTWNVYRTFFVFLVFYTIFLYFCFCSAFL 687
FL FL F + +YF + +Y +F++ +++ FLYF + FL
Sbjct: 62 FLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFL 111
Score = 33.9 bits (74), Expect = 3.8
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +1
Query: 538 FLLFLTFFAIPFIFNQT*IVYFTWNVYRTFFVFLVFYTIFLYFCFCSAFL 687
FL FL F + +YF + +Y +F++ +++ FLYF + FL
Sbjct: 65 FLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFL 114
Score = 32.7 bits (71), Expect = 8.8
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +1
Query: 532 YPFLLFLTFFAIPFIFNQT*IVYFTWNVYRTFFVFLVFYTIFLYFCFCSAFL 687
Y L FL F + +YF + +Y +F++ +++ FLYF + FL
Sbjct: 27 YYHLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFL 78
Score = 32.7 bits (71), Expect = 8.8
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +1
Query: 538 FLLFLTFFAIPFIFNQT*IVYFTWNVYRTFFVFLVFYTIFLYFCFCSAFL 687
FL FL F + +YF + +Y +F++ +++ FLYF + +L
Sbjct: 71 FLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFLYFYYYL 120
>UniRef50_Q10J35 Cluster: Retrotransposon protein, putative, Ty1-copia
subclass; n=24; Magnoliophyta|Rep: Retrotransposon
protein, putative, Ty1-copia subclass - Oryza sativa
subsp. japonica (Rice)
Length = 1469
Score = 33.5 bits (73), Expect = 5.0
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = -3
Query: 275 FWSVRICILFTSSNHSSYSKLYDALTNSIKWCTKLIHSIE 156
+WSV+ ++ TS+NHS LY+A + W ++I+ I+
Sbjct: 1330 WWSVKQTLVVTSTNHSEIIALYEAARECV-WLRRMINHIQ 1368
>UniRef50_Q5AGI5 Cluster: Putative uncharacterized protein; n=2;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 191
Score = 33.5 bits (73), Expect = 5.0
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +1
Query: 538 FLLFLTFFAIPFIFNQT*IVYFTWNVYRTFFVFLVFYTIFLYFCF 672
F+ F FF + +F ++ + ++ FF+FL+F+ L+F F
Sbjct: 90 FMFFFLFFFLSMVFFLFLFMFLLFFMFFLFFMFLLFFMFLLFFMF 134
>UniRef50_Q33563 Cluster: EATRO 164 kinetoplast; n=1; Trypanosoma
brucei|Rep: EATRO 164 kinetoplast - Trypanosoma brucei
Length = 141
Score = 32.7 bits (71), Expect = 8.8
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +1
Query: 547 FLTFFAIPFIFNQT*IVYFTWNVYRTFFVFLVFYTIFLYFCF 672
FL F+ + F + IVYF +V F F F FLY CF
Sbjct: 48 FLLFWVVIFYWCFDCIVYFFCDVIILFIFFFYFVLCFLYCCF 89
>UniRef50_Q5A659 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 126
Score = 32.7 bits (71), Expect = 8.8
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +1
Query: 538 FLLFLTFFA-IPFIFNQT*IVYFTWNVYRTFFVFLVFYTIFLYFCFCSAFL 687
FL FL+F + + F+F + + + ++ + FF F F + F + CF + FL
Sbjct: 53 FLSFLSFLSFLSFLFFLSFLSFLSFFSFFFFFSFFSFLSFFSFLCFFNVFL 103
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 524,704,484
Number of Sequences: 1657284
Number of extensions: 8352629
Number of successful extensions: 18561
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 17784
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18494
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54545459628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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