Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0833
         (695 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    27   0.19 
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    23   2.4  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   5.5  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    22   5.5  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   7.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.6  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 26.6 bits (56), Expect = 0.19
 Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 6/86 (6%)
 Frame = +3

Query: 147 LADIWYSPLYLGVI--ILRAFSCHYNETNVLLSGD*TFGMSSEELNLVRKWYHN*NSDI- 317
           L D++Y  L + +I  ++R+F   Y + N  L        S EEL  +  +Y      + 
Sbjct: 176 LMDVYYEFLLISLINILIRSFKSRYKDLNQKLETACEQSKSVEELMNIANYYRILGDTVE 235

Query: 318 ---SLFEKKRVHTVFDLDYYS*SILN 386
              SLF  + +  +FD    + S LN
Sbjct: 236 IFNSLFGYQIILVIFDCCLETVSALN 261


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +2

Query: 362 LLFLVNFKCT*M*SNSMYTVCYNLIDCNAVLKT 460
           LLF V    + +  NS YT  Y+ +D + ++K+
Sbjct: 7   LLFFVIAIASSLAENSKYTTKYDNVDLDEIIKS 39


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +1

Query: 1   EKLINNNQVLQSPTKRICLYKQVNILHSLN 90
           E+   +N  L SP+      KQ+N+ H+ N
Sbjct: 286 ERETGHNAPLYSPSSDSQYQKQLNVEHAAN 315


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 199 LSVVITMKQMFCSLGIKLLG 258
           L+ V+  +Q +C L  KLLG
Sbjct: 82  LAPVLCKRQQYCQLMSKLLG 101


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 154 SASRHRIVHSPI 119
           SASRH + H P+
Sbjct: 155 SASRHHVDHQPV 166


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/26 (26%), Positives = 16/26 (61%)
 Frame = +1

Query: 94   LKSVTILTRLGNALFCDGLQIYGILH 171
            +K++ I+   G  +F +G+ I  ++H
Sbjct: 1154 IKAIIIMILSGCIIFTEGIWICSLIH 1179


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,520
Number of Sequences: 336
Number of extensions: 3636
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)