Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0832
         (694 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   3.1  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   3.1  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    22   5.5  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    22   5.5  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   7.2  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 296 KGCRARYRISIPQRYLRSCR 355
           K CRARY +    ++ + CR
Sbjct: 572 KKCRARYGLDQQNQWCKPCR 591


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 296 KGCRARYRISIPQRYLRSCR 355
           K CRARY +    ++ + CR
Sbjct: 464 KKCRARYGLDQQNQWCKPCR 483


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 6/13 (46%), Positives = 7/13 (53%)
 Frame = -2

Query: 57  WIPKIFCCCWYYL 19
           W P    C WY+L
Sbjct: 288 WTPYYVMCIWYWL 300


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 6/13 (46%), Positives = 7/13 (53%)
 Frame = -2

Query: 57  WIPKIFCCCWYYL 19
           W P    C WY+L
Sbjct: 288 WTPYYVMCIWYWL 300


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +2

Query: 551 DPNGNLQLGGS 583
           DPNGN+ LG S
Sbjct: 159 DPNGNVPLGKS 169


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,041
Number of Sequences: 336
Number of extensions: 3636
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)