Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0831
(691 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 27 0.19
EF592537-1|ABQ95983.1| 593|Tribolium castaneum beta-N-acetylglu... 24 1.0
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 23 1.8
AY531877-1|AAT08872.1| 247|Tribolium castaneum ORF1p protein. 23 2.4
AM292351-1|CAL23163.2| 394|Tribolium castaneum gustatory recept... 23 2.4
AM292350-1|CAL23162.2| 429|Tribolium castaneum gustatory recept... 23 2.4
AM292328-1|CAL23140.2| 429|Tribolium castaneum gustatory recept... 23 2.4
U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein. 23 3.1
EF592539-1|ABQ95985.1| 630|Tribolium castaneum beta-N-acetylglu... 22 4.1
EF592536-1|ABQ95982.1| 598|Tribolium castaneum beta-N-acetylglu... 22 5.4
AM292323-1|CAL23135.2| 587|Tribolium castaneum gustatory recept... 22 5.4
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 26.6 bits (56), Expect = 0.19
Identities = 19/87 (21%), Positives = 36/87 (41%)
Frame = +2
Query: 344 PEDARPTGXRGDSRRPTTSVSAVRRPCQAARAMPLVFRDTPLGQNQPTGS*SDTPRPGFS 523
P+D G S P ++ S + PL +P G+ + + + P S
Sbjct: 113 PQDLSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTTSQNLSSPA-S 171
Query: 524 STVCSATNESVNPHRSSAVADASSRPP 604
ST +++ E + +++ + SS PP
Sbjct: 172 STSSTSSTEKAGTNNNNSKSSQSSNPP 198
>EF592537-1|ABQ95983.1| 593|Tribolium castaneum
beta-N-acetylglucosaminidase NAG2 protein.
Length = 593
Score = 24.2 bits (50), Expect = 1.0
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -1
Query: 211 PWARGLLPTPCRSLSPTNP 155
PW + PC L+P NP
Sbjct: 333 PWRSYCIQPPCGQLNPINP 351
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 23.4 bits (48), Expect = 1.8
Identities = 19/56 (33%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Frame = +1
Query: 349 GRPTDGXSRR*STTNDVGLRGTAALPGRPGNAAGVPGYPAGPEPAYRVVKR-YTAT 513
G P G S + D GL + PG G G+ A E RV KR +T T
Sbjct: 2562 GMPLYGQSFSLADAADRGLNAKSYGPGEAGEFTRAGGFLAYYEICERVKKRGWTVT 2617
Score = 21.8 bits (44), Expect = 5.4
Identities = 14/48 (29%), Positives = 19/48 (39%)
Frame = +1
Query: 349 GRPTDGXSRR*STTNDVGLRGTAALPGRPGNAAGVPGYPAGPEPAYRV 492
G P G S R + GL A PG+ G G+ A E + +
Sbjct: 1639 GMPLYGQSFRLEKPENHGLNAKAPGPGQAGEYTRAAGFLAYYEICHNI 1686
>AY531877-1|AAT08872.1| 247|Tribolium castaneum ORF1p protein.
Length = 247
Score = 23.0 bits (47), Expect = 2.4
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +3
Query: 315 QHYNQTCGATPRTPDRRXXEAIVDDQRRRSPRY 413
+ Y+Q+ G ++ +R + +DQ RR+P Y
Sbjct: 201 RQYSQSRGRHNQSRSKRQPKTGREDQTRRNPYY 233
>AM292351-1|CAL23163.2| 394|Tribolium castaneum gustatory receptor
candidate 30 protein.
Length = 394
Score = 23.0 bits (47), Expect = 2.4
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +1
Query: 37 VTLYNFFFSFRPKLERLYIFFFFG 108
+ L+N + LER+Y ++ FG
Sbjct: 304 IQLFNSLRQMKNNLERIYFYWSFG 327
>AM292350-1|CAL23162.2| 429|Tribolium castaneum gustatory receptor
candidate 29 protein.
Length = 429
Score = 23.0 bits (47), Expect = 2.4
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +1
Query: 37 VTLYNFFFSFRPKLERLYIFFFFG 108
+ L+N + LER+Y ++ FG
Sbjct: 304 IQLFNSLRQMKNNLERIYFYWSFG 327
>AM292328-1|CAL23140.2| 429|Tribolium castaneum gustatory receptor
candidate 7 protein.
Length = 429
Score = 23.0 bits (47), Expect = 2.4
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +1
Query: 37 VTLYNFFFSFRPKLERLYIFFFFG 108
+ L+N + LER+Y ++ FG
Sbjct: 304 IQLFNSLRQMKNNLERIYFYWSFG 327
>U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein.
Length = 470
Score = 22.6 bits (46), Expect = 3.1
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 611 WHQEDGTTRRRLRNCDAGSRFRSS 540
W T ++RLR+CD + +SS
Sbjct: 158 WPNMYRTIKKRLRSCDLCQKTKSS 181
>EF592539-1|ABQ95985.1| 630|Tribolium castaneum
beta-N-acetylglucosaminidase FDL protein.
Length = 630
Score = 22.2 bits (45), Expect = 4.1
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -1
Query: 211 PWARGLLPTPCRSLSPTNP 155
PW+ PC L+P NP
Sbjct: 356 PWSLYCGEPPCGQLNPDNP 374
Score = 21.0 bits (42), Expect = 9.5
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +2
Query: 173 GSARCWKQTTGP 208
GS + W Q TGP
Sbjct: 87 GSTQLWPQPTGP 98
>EF592536-1|ABQ95982.1| 598|Tribolium castaneum
beta-N-acetylglucosaminidase NAG1 protein.
Length = 598
Score = 21.8 bits (44), Expect = 5.4
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = -1
Query: 211 PWARGLLPTPCRSLSPT 161
PW+ + PC L PT
Sbjct: 320 PWSNYCVEPPCGQLDPT 336
>AM292323-1|CAL23135.2| 587|Tribolium castaneum gustatory receptor
candidate 2 protein.
Length = 587
Score = 21.8 bits (44), Expect = 5.4
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 37 VTLYNFFFSFRPKLERLYIFFFF 105
+ L+N R LERLY ++ F
Sbjct: 302 IQLFNSLRRMRNDLERLYFYWSF 324
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,154
Number of Sequences: 336
Number of extensions: 4871
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -