Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0831
(691 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_39673| Best HMM Match : TRAP-delta (HMM E-Value=1.2e-32) 34 0.12
SB_23055| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29
SB_6496| Best HMM Match : Collagen (HMM E-Value=0) 32 0.38
SB_46036| Best HMM Match : PSRT (HMM E-Value=1) 32 0.38
SB_55337| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.67
SB_12397| Best HMM Match : Extensin_2 (HMM E-Value=0.14) 31 0.88
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_37045| Best HMM Match : Drf_FH1 (HMM E-Value=0.95) 31 1.2
SB_34910| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_12387| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_5862| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_32588| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_9366| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_18882| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_55147| Best HMM Match : TPR_2 (HMM E-Value=1.8e-10) 29 2.7
SB_25350| Best HMM Match : Collagen (HMM E-Value=0) 29 2.7
SB_18951| Best HMM Match : EGF (HMM E-Value=2.1e-06) 29 2.7
SB_45345| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_41262| Best HMM Match : DUF1581 (HMM E-Value=5) 29 3.6
SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11) 29 3.6
SB_57129| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 29 3.6
SB_31478| Best HMM Match : Extensin_2 (HMM E-Value=1.3) 29 4.7
SB_51968| Best HMM Match : PT (HMM E-Value=0.54) 29 4.7
SB_20283| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_50059| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_36009| Best HMM Match : Collagen (HMM E-Value=0) 28 6.2
SB_8448| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_36095| Best HMM Match : DMP1 (HMM E-Value=3.2) 28 6.2
SB_33497| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_32637| Best HMM Match : Glyoxalase (HMM E-Value=1.5e-08) 28 6.2
SB_29198| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_22693| Best HMM Match : DUF1042 (HMM E-Value=0.00027) 28 6.2
SB_13374| Best HMM Match : Cornifin (HMM E-Value=0.34) 28 6.2
SB_33125| Best HMM Match : Pkinase (HMM E-Value=0) 28 8.2
>SB_39673| Best HMM Match : TRAP-delta (HMM E-Value=1.2e-32)
Length = 504
Score = 33.9 bits (74), Expect = 0.12
Identities = 34/122 (27%), Positives = 53/122 (43%), Gaps = 2/122 (1%)
Frame = +2
Query: 254 PRRPISVRGQNPVRVXGLPRSTLQPDLRRHPEDARPTGXRGDSRRPTTSVSAVRRPCQAA 433
P ++VR + PV + L + T +P R + ARP RP++S AVR P
Sbjct: 376 PSSSLAVR-EPPVLLLALSQRTARPPPRSNQRTARPPPRSKSENRPSSSSLAVREPPVLL 434
Query: 434 RAMPLVFRDTPLGQNQPTGS*SDTPRPGFSSTVCSATNESVN--PHRSSAVADASSRPPG 607
A+ P NQ T + P S S+++ +V P A++ ++RPP
Sbjct: 435 LALSQRTARPPPRSNQRT---ARPPPRSKSENRPSSSSLAVREPPVLLLALSQRTARPPP 491
Query: 608 AS 613
S
Sbjct: 492 RS 493
>SB_23055| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 377
Score = 32.7 bits (71), Expect = 0.29
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -3
Query: 473 GPAGYPGTPAALPGRPGKAAVP 408
GP G PGTP +PG+PGKA P
Sbjct: 200 GPIGPPGTPG-VPGQPGKAGSP 220
>SB_6496| Best HMM Match : Collagen (HMM E-Value=0)
Length = 1234
Score = 32.3 bits (70), Expect = 0.38
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = +1
Query: 388 TNDVGLRGTAALPGRPGN--AAGVPGYPAGPEP 480
T VG +G+ LPG+PG+ G+PG GP P
Sbjct: 1131 TGPVGEQGSYGLPGKPGSPGTKGLPGPKGGPGP 1163
Score = 28.3 bits (60), Expect = 6.2
Identities = 18/48 (37%), Positives = 22/48 (45%)
Frame = +3
Query: 135 PAPRGRAGFVGLKDLQGVGSRPRAQGILGPTH*TTPLHYYPDVRSPSG 278
P P G AG G++ QGV + +G GP P P VR P G
Sbjct: 73 PGPEGPAGVQGMEGRQGVQGKDGEEGPPGPN--GAPGR--PGVRGPKG 116
>SB_46036| Best HMM Match : PSRT (HMM E-Value=1)
Length = 878
Score = 32.3 bits (70), Expect = 0.38
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +1
Query: 226 PTKRLPCTITPTSDLRPGSKPGQSRXVAAVNTTTRLAAPPRGRPTDGXSR 375
P R ++PT +RP S GQS V + +R PR R T +R
Sbjct: 509 PLPRQTRRVSPTQAVRPSSTQGQSAPVGRTKSPSRSYTSPRQRRTSPNNR 558
>SB_55337| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1853
Score = 31.5 bits (68), Expect = 0.67
Identities = 19/46 (41%), Positives = 23/46 (50%)
Frame = +1
Query: 337 APPRGRPTDGXSRR*STTNDVGLRGTAALPGRPGNAAGVPGYPAGP 474
A P G P G + + + GL G L G G+A GVPG P GP
Sbjct: 1312 AGPPGLP--GRAGQAGPKGETGLPGMPGLDGEKGSA-GVPGIPGGP 1354
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -3
Query: 476 SGPAGYPGTPAALPGRPG 423
+GP G PG P LPGRPG
Sbjct: 961 TGPTGPPGPPG-LPGRPG 977
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +1
Query: 388 TNDVGLRGTAALPGRPGNAAGVPGYPAGPE 477
T + GL G + PG PG G PG P GPE
Sbjct: 1045 TGEKGLDGPSGPPGTPGQ-PGPPG-PRGPE 1072
>SB_12397| Best HMM Match : Extensin_2 (HMM E-Value=0.14)
Length = 659
Score = 31.1 bits (67), Expect = 0.88
Identities = 21/74 (28%), Positives = 31/74 (41%)
Frame = +2
Query: 392 TTSVSAVRRPCQAARAMPLVFRDTPLGQNQPTGS*SDTPRPGFSSTVCSATNESVNPHRS 571
T+S + + Q + P+ + Q T + +P SS +C T S PH S
Sbjct: 31 TSSTTGLTTSIQPQTSSPIFHTTSTRPQTTTTVGSTILTQPQTSSAICHTT--STQPHTS 88
Query: 572 SAVADASSRPPGAS 613
SAV +S P S
Sbjct: 89 SAVGHTTSTKPQKS 102
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = +1
Query: 400 GLRGTAALPGRPGNAAGVPGYPAGPE 477
GLRG LPG+PG G PG P GP+
Sbjct: 3343 GLRGKTGLPGKPGK--GKPG-PTGPK 3365
>SB_37045| Best HMM Match : Drf_FH1 (HMM E-Value=0.95)
Length = 1080
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +2
Query: 344 PEDARPTGXRGDSRRPTTSVSAVRRPCQAARAMPLV 451
PE R G +RRP ++++ +R P Q A A PLV
Sbjct: 863 PETPRRAGRGRVARRPGSAIARLRAPPQRAAASPLV 898
>SB_34910| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2147
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/56 (33%), Positives = 26/56 (46%)
Frame = +2
Query: 461 TPLGQNQPTGS*SDTPRPGFSSTVCSATNESVNPHRSSAVADASSRPPGASGARVT 628
T + QN P+ + + S+ V SAT ES RSS V + PP + VT
Sbjct: 965 TSVTQNPPSSQVTSVTQESHSTQVTSATQES----RSSQVTSVTQEPPSSQVTSVT 1016
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/56 (35%), Positives = 25/56 (44%)
Frame = +2
Query: 461 TPLGQNQPTGS*SDTPRPGFSSTVCSATNESVNPHRSSAVADASSRPPGASGARVT 628
T + Q P+ + + SS V SAT ES RSS V A+ PP VT
Sbjct: 1085 TSVTQESPSSQVTSATQESRSSQVTSATQES----RSSQVTSATQEPPSTQVTSVT 1136
>SB_12387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1096
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 1/73 (1%)
Frame = -2
Query: 525 EEKPGRGVSLYDPVGWFWPSGVSRNTSGIARAAWQ-GRRTAETDVVGRRLSPRXPVGRAS 349
++ G+G + D + WP G + + R +W G DV RRLS G S
Sbjct: 573 QQMQGKGPTAADVMRLSWPLGEGPTAADVRRLSWPLGEGPTAADV--RRLSWPLGEGPNS 630
Query: 348 SGWRRKSGCSVDR 310
S W + V R
Sbjct: 631 SRWEGPTAADVRR 643
>SB_5862| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2353
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Frame = -3
Query: 482 AGSGPAGYPGT-PAALPGRPGKAAVPRRPTSLVVDYRLXXPSVGRPRG 342
AG GP GT PA PG P A P+ R+ G+P G
Sbjct: 1511 AGHGPDSPAGTNPATNPGAPDNVATPKLTVLSANSIRVQWTPPGKPNG 1558
>SB_32588| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1135
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/40 (45%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +1
Query: 394 DVGLRGTAALPGRPGNAAGVPGYPAGPEP-AYRVVKRYTA 510
DV T +PG G A PG P GPE +RV YTA
Sbjct: 1031 DVPSVPTRPIPGPHGAATPPPGPPGGPEERRWRVDDEYTA 1070
>SB_9366| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1221
Score = 29.9 bits (64), Expect = 2.0
Identities = 24/90 (26%), Positives = 37/90 (41%), Gaps = 2/90 (2%)
Frame = +2
Query: 359 PTGXRGDSRRPTTSVSAVRRPCQAARAMPLVFRDTPLGQNQPTGS*SDTPRPGFSSTVCS 538
PT G S TS + ++ + MP GQ+ P + +P S +
Sbjct: 367 PTSTPGPSSARRTSYTGLQNHTPSKPPMPAKSPGRHSGQSSPRQA---SPPQSVKSPIHF 423
Query: 539 ATNES--VNPHRSSAVADASSRPPGASGAR 622
N+S +P RS + + SSRPP S +
Sbjct: 424 QANKSPPFHPQRSPSASKPSSRPPPLSSVQ 453
>SB_18882| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 272
Score = 29.9 bits (64), Expect = 2.0
Identities = 23/65 (35%), Positives = 31/65 (47%)
Frame = +1
Query: 220 GPPTKRLPCTITPTSDLRPGSKPGQSRXVAAVNTTTRLAAPPRGRPTDGXSRR*STTNDV 399
G PT+ L +PTS L P S +A + T+ L A RG PT R S T+ +
Sbjct: 103 GSPTRSLIARGSPTSSLIARGSP-TSSLIARGSPTSSLIA--RGSPTSSLIARGSPTSSL 159
Query: 400 GLRGT 414
RG+
Sbjct: 160 IARGS 164
>SB_55147| Best HMM Match : TPR_2 (HMM E-Value=1.8e-10)
Length = 559
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = -3
Query: 482 AGSGPAGYPGTPAALPGRPGKAAVPRRPTSLVVDYRLXXPSV 357
AG P G+PG G PG +P P + ++ L P V
Sbjct: 197 AGGMPGGFPGAGGMPGGFPGAGGMPGGPGGIDINTILNDPEV 238
>SB_25350| Best HMM Match : Collagen (HMM E-Value=0)
Length = 1112
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +1
Query: 343 PRGRPTD-GXSRR*STTNDVGLRGTAALPGRPGNAAGVPG 459
P G+P D G + T + G +GT PG PG G+PG
Sbjct: 493 PTGKPGDRGSNGADGTPGEPGAQGTKRKPGTPGR-QGMPG 531
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = +1
Query: 343 PRGRPTDGXSRR*STTNDVGLRGTAALPGRPGNAA--GVPGYPAGP 474
P R +DG + G G+A + GRPG G PG P P
Sbjct: 101 PGPRGSDGPRGQRGEVGLPGESGSAGMVGRPGRPGFDGAPGAPGSP 146
>SB_18951| Best HMM Match : EGF (HMM E-Value=2.1e-06)
Length = 1223
Score = 29.5 bits (63), Expect = 2.7
Identities = 28/104 (26%), Positives = 41/104 (39%), Gaps = 5/104 (4%)
Frame = +2
Query: 308 PRSTLQPDLRRHPEDARPTGXRGDSRRPTTSVSA-VRRPCQAARAMPLVFRDTPL---GQ 475
PR++ + R + P R SR+ + S RP + + R + GQ
Sbjct: 334 PRASPRASPRDQSSHSSPRNSRNSSRKSSPKPSPRSSRPTSSRKLSRKSSRKSSRPTSGQ 393
Query: 476 NQPTG-S*SDTPRPGFSSTVCSATNESVNPHRSSAVADASSRPP 604
P S SDT S+V S +E + VAD + RPP
Sbjct: 394 QSPVNVSGSDTDSSDSDSSVSSKASEGKPDKSAPDVADGARRPP 437
>SB_45345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2346
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +1
Query: 229 TKRLPCTITPTSDLRPGSKPGQSRXVAAVNTTTRLAAPPRGRPTDGXSR 375
T+ ++ T+D R + G S + AV+ +L P R P DG +R
Sbjct: 1182 TENASVNVSSTNDKRLSPELGVSETIQAVSAEDKLKLPRRLLPKDGLAR 1230
>SB_41262| Best HMM Match : DUF1581 (HMM E-Value=5)
Length = 521
Score = 29.1 bits (62), Expect = 3.6
Identities = 24/85 (28%), Positives = 34/85 (40%), Gaps = 6/85 (7%)
Frame = +2
Query: 332 LRRHPEDARPTGXRGDSRRPTTSV------SAVRRPCQAARAMPLVFRDTPLGQNQPTGS 493
L +H +A P +S +P T S +R PC +P L +N TGS
Sbjct: 19 LTQHTSNACPYQDAIESSKPQTGYRGPDVGSVIRAPCLPLSNLP---NHVDLQENCTTGS 75
Query: 494 *SDTPRPGFSSTVCSATNESVNPHR 568
S P F + ES+N H+
Sbjct: 76 TSGARNPRFQIDQEFLSEESINGHK 100
>SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11)
Length = 1903
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -3
Query: 473 GPAGYPGTPAALPGRPGKAAVP 408
G GYPG PA PGR G P
Sbjct: 1704 GIPGYPGAPAGPPGRDGPMGPP 1725
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -3
Query: 473 GPAGYPGTPAALPGRPGKAAVPRR 402
G GYPG PA PGR G P R
Sbjct: 1853 GWKGYPGNPAGPPGRDGIPGPPGR 1876
>SB_57129| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 456
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 175 ICKVLEADHGPKEF*GPPTKRLPCTITPTSDL 270
+ K L AD G + P T +PC + PTS++
Sbjct: 53 VMKNLHADEGVISYRNPATLPVPCQVIPTSNI 84
>SB_31478| Best HMM Match : Extensin_2 (HMM E-Value=1.3)
Length = 515
Score = 28.7 bits (61), Expect = 4.7
Identities = 21/61 (34%), Positives = 24/61 (39%)
Frame = +1
Query: 106 GPGAEPPTRSPRLGGARGLWDSRICKVLEADHGPKEF*GPPTKRLPCTITPTSDLRPGSK 285
GP PP PR RG D R GP++ GP +R P P S G K
Sbjct: 366 GPQDRPPWDGPREQDFRGPRDPRAQPAHNPRPGPQDPRGPQDRR-PPNEQPRSQEGSGPK 424
Query: 286 P 288
P
Sbjct: 425 P 425
>SB_51968| Best HMM Match : PT (HMM E-Value=0.54)
Length = 514
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = -1
Query: 190 PTPCRSLSPTNPARPLGAGTS*EVRPPARKKRKYIVSQA*DETKKK 53
PT + PT P P G G P RK K I+ Q + K K
Sbjct: 463 PTEIPTKKPTKPLLPEGEGEERATPRPTRKPTKKIIPQTNNTMKTK 508
>SB_20283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 956
Score = 28.7 bits (61), Expect = 4.7
Identities = 22/65 (33%), Positives = 28/65 (43%)
Frame = +1
Query: 262 SDLRPGSKPGQSRXVAAVNTTTRLAAPPRGRPTDGXSRR*STTNDVGLRGTAALPGRPGN 441
S L+ + GQ A +T+T L A G PT S S+T G +P GN
Sbjct: 679 SSLKQNTFGGQPTSQGAFDTSTNLGA--FGAPTPTPSSFGSSTAPQTAFGGQGVPQNTGN 736
Query: 442 AAGVP 456
A G P
Sbjct: 737 AFGAP 741
>SB_50059| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +2
Query: 455 RDTPLGQNQPTGS*SDTPRPGFSSTVCSATNESVNPHRSSAVADASSRPP 604
R TP G ++ +D P S +C T E NP R++ S RPP
Sbjct: 5 RKTPRGYHRAHAHDTDQP-----SDLCQRTAEPQNPSRTAEPLSHSKRPP 49
>SB_36009| Best HMM Match : Collagen (HMM E-Value=0)
Length = 687
Score = 28.3 bits (60), Expect = 6.2
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +1
Query: 304 VAAVNTTTRLAAPPRGRPTDGXSRR*STTNDVGLRGTAALPGRPGN--AAGVPGYP 465
V+ V T L PP+GR S G +G +PG+PGN AAG+ G P
Sbjct: 361 VSLVICLTVLTIPPQGRAGAPGSPGLG-----GQKGDQGMPGKPGNPGAAGLRGAP 411
>SB_8448| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 28.3 bits (60), Expect = 6.2
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +3
Query: 186 VGSRPRAQGILGPTH*TTPLHYYPDVRSPSGVKTRSE*XGCRGQHYNQTCG 338
+GS PR G+LGP T L ++ SGVKTR C ++ G
Sbjct: 43 LGSNPRHTGVLGPNPRHTGLEFF------SGVKTRLYTGDCESLVFSAKSG 87
>SB_36095| Best HMM Match : DMP1 (HMM E-Value=3.2)
Length = 939
Score = 28.3 bits (60), Expect = 6.2
Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 1/89 (1%)
Frame = +1
Query: 223 PPTKRLPCTITPTSDLRPGSKPGQSRXVAAVNTTTRLAAPPRGRPTDGXSRR*STTNDVG 402
P T+ P T +D R + P +N +A +G+ + ++ T
Sbjct: 798 PRTRNDPRT---RNDPRTRNDPSTRNDPRTLNQPHGIAVMDKGKAEENTGKKVLPTQVNV 854
Query: 403 LRGTAALPGR-PGNAAGVPGYPAGPEPAY 486
L + G+ PGN A PGYPA P Y
Sbjct: 855 LDEIVSAQGQEPGNPAQAPGYPA-QAPGY 882
>SB_33497| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 28.3 bits (60), Expect = 6.2
Identities = 30/114 (26%), Positives = 47/114 (41%), Gaps = 15/114 (13%)
Frame = +2
Query: 326 PDLRRHPEDARPTGX-RGDSRRPTTSVSAVRRPCQAARAMPLVFRDTPLGQ--------- 475
P R+ P ++P RG+S P T VR + + P +PLG+
Sbjct: 616 PQDRQAPRHSKPLSTPRGESSSPNTIPDRVRNQPGSGNSSPRSGASSPLGRASSPNSKKG 675
Query: 476 ---NQPTGS--*SDTPRPGFSSTVCSATNESVNPHRSSAVADASSRPPGASGAR 622
N P G+ +++P P +S A + S R+S+ + G SGAR
Sbjct: 676 SRVNSPIGARRRANSPGPSINSPRGRAESPSNAHGRASSPSGTRGPVSGPSGAR 729
>SB_32637| Best HMM Match : Glyoxalase (HMM E-Value=1.5e-08)
Length = 203
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = +2
Query: 170 QGSARCWKQTTGPRNFRAHPLNDSPALLPRRPISV 274
Q R KQ TG +F+AH L S LL RRP S+
Sbjct: 28 QEPKRWRKQETGD-DFKAHALFSSKRLLTRRPQSI 61
>SB_29198| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 248
Score = 28.3 bits (60), Expect = 6.2
Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Frame = -1
Query: 538 RTYCGRETRSRCIALRPGRLVLAQRGIPEHQRHCPGGLAR--PPYRGDRRRWSSTIASXX 365
RT C R + LV A + QR + R PP G R RWSS++
Sbjct: 49 RTMCRRPIPMAHAERQVNELVRAPLNVFRRQRRQTSAVCRSDPPQLGYRGRWSSSVIDRP 108
Query: 364 RRS 356
R +
Sbjct: 109 RHT 111
>SB_22693| Best HMM Match : DUF1042 (HMM E-Value=0.00027)
Length = 2261
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +1
Query: 334 AAPPRGRPTDGXSRR*STTNDVGLRGTAALP 426
+ PP G PTDG TT + G G +A P
Sbjct: 1115 SVPPEGEPTDGQQSAEGTTGE-GAEGPSAAP 1144
>SB_13374| Best HMM Match : Cornifin (HMM E-Value=0.34)
Length = 1197
Score = 28.3 bits (60), Expect = 6.2
Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 1/96 (1%)
Frame = +2
Query: 314 STLQPDLRRHPEDARPTGXRGDSRRPTTSVSAVRRPCQAARAMP-LVFRDTPLGQNQPTG 490
ST L R P A P+ G + T + P A ++P TP + T
Sbjct: 1001 STPGAALSRTP-GAAPSSTPGAASSTTPGAAPSSTPGAAMSSIPGATSSSTPGAASSSTP 1059
Query: 491 S*SDTPRPGFSSTVCSATNESVNPHRSSAVADASSR 598
+ + PG +S++ + SV+P SS+ A + R
Sbjct: 1060 GAAPSSTPGAASSITRRADPSVSPEASSSGAFSKRR 1095
>SB_33125| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 937
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3
Query: 422 KAAVPRRPTSLVVDYRLXXPSVGRP 348
+ AVPR TS D + P++GRP
Sbjct: 428 RQAVPRHRTSATADSSIPAPAIGRP 452
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,440,539
Number of Sequences: 59808
Number of extensions: 669002
Number of successful extensions: 2573
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 2033
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2557
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1793485733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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