Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0830
         (695 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-2032|AAF53071.3|  461|Drosophila melanogaster CG14916-P...    36   0.069
BT016113-1|AAV36998.1| 1193|Drosophila melanogaster LD10462p pro...    30   2.6  
BT001511-1|AAN71266.1| 1193|Drosophila melanogaster LD43392p pro...    30   2.6  
AE014297-2173|AAF55292.2| 1193|Drosophila melanogaster CG12785-P...    30   2.6  

>AE014134-2032|AAF53071.3|  461|Drosophila melanogaster CG14916-PA
           protein.
          Length = 461

 Score = 35.5 bits (78), Expect = 0.069
 Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
 Frame = -3

Query: 591 YLFVILAVLHTLITFNYYS-HNPLAALLERFLKEISSALYIIFLLLC----TMSSFLCVH 427
           Y F +  V+H L  FN YS   P++A L    +E  +    I LLLC    T++ F+C H
Sbjct: 91  YSFFVRGVVHALTIFNVYSLFTPISAQLFFSYRETDNVNQWIELLLCILTYTLTVFVCAH 150


>BT016113-1|AAV36998.1| 1193|Drosophila melanogaster LD10462p
           protein.
          Length = 1193

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
 Frame = -3

Query: 549 FNYYSHNPLAALLERF--LKEISSALYIIFLLLCTMSSF 439
           FNYY++NPL  +LE     K+++  L +   +   +SSF
Sbjct: 226 FNYYANNPLKPVLELIPVTKQVNKHLQVRLFITAPLSSF 264


>BT001511-1|AAN71266.1| 1193|Drosophila melanogaster LD43392p
           protein.
          Length = 1193

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
 Frame = -3

Query: 549 FNYYSHNPLAALLERF--LKEISSALYIIFLLLCTMSSF 439
           FNYY++NPL  +LE     K+++  L +   +   +SSF
Sbjct: 226 FNYYANNPLKPVLELIPVTKQVNKHLQVRLFITAPLSSF 264


>AE014297-2173|AAF55292.2| 1193|Drosophila melanogaster CG12785-PA
           protein.
          Length = 1193

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
 Frame = -3

Query: 549 FNYYSHNPLAALLERF--LKEISSALYIIFLLLCTMSSF 439
           FNYY++NPL  +LE     K+++  L +   +   +SSF
Sbjct: 226 FNYYANNPLKPVLELIPVTKQVNKHLQVRLFITAPLSSF 264


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,802,452
Number of Sequences: 53049
Number of extensions: 592095
Number of successful extensions: 944
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 944
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3046624548
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)