Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0827
         (561 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M22874-2|AAA28675.1|  916|Drosophila melanogaster protein ( D.me...    30   1.9  
BT024937-1|ABE01167.1|  575|Drosophila melanogaster IP16068p pro...    28   9.9  
AY129450-1|AAM76192.1|  979|Drosophila melanogaster LD36241p pro...    28   9.9  
AY058622-1|AAL13851.1|  977|Drosophila melanogaster LD31525p pro...    28   9.9  
AE014298-795|AAF46081.1|  507|Drosophila melanogaster CG15769-PA...    28   9.9  
AE014296-1278|AAF50545.3| 1166|Drosophila melanogaster CG7546-PB...    28   9.9  
AE014296-1277|AAF50546.2| 1332|Drosophila melanogaster CG7546-PA...    28   9.9  

>M22874-2|AAA28675.1|  916|Drosophila melanogaster protein (
           D.melanogaster LINEelement J-1, clone J-1. ).
          Length = 916

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 14/44 (31%), Positives = 27/44 (61%)
 Frame = +2

Query: 194 WXSPSKMPQIRLLRGIRPYSGQFET*NGTGEPLEYNWHKFLTPN 325
           W +P   P+ ++L+ +  + GQ++    TGEP  Y+++  LTP+
Sbjct: 146 WGNPRSCPRGKMLQEVIAH-GQYQV-LATGEPTFYSYNPLLTPS 187


>BT024937-1|ABE01167.1|  575|Drosophila melanogaster IP16068p
           protein.
          Length = 575

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +1

Query: 388 GTCIIVLPHPYTKPDINCFLEVCKVLRKKFEVSIKFYNG 504
           G  ++ LP  Y +P+ N    VC +LR    + I+  NG
Sbjct: 260 GESLVYLPQ-YERPEYNSRDSVCNILRVSLRLIIELCNG 297


>AY129450-1|AAM76192.1|  979|Drosophila melanogaster LD36241p
           protein.
          Length = 979

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +1

Query: 388 GTCIIVLPHPYTKPDINCFLEVCKVLRKKFEVSIKFYNG 504
           G  ++ LP  Y +P+ N    VC +LR    + I+  NG
Sbjct: 665 GESLVYLPQ-YERPEYNSRDSVCNILRVSLRLIIELCNG 702


>AY058622-1|AAL13851.1|  977|Drosophila melanogaster LD31525p
           protein.
          Length = 977

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +1

Query: 388 GTCIIVLPHPYTKPDINCFLEVCKVLRKKFEVSIKFYNG 504
           G  ++ LP  Y +P+ N    VC +LR    + I+  NG
Sbjct: 662 GESLVYLPQ-YERPEYNSRDSVCNILRVSLRLIIELCNG 699


>AE014298-795|AAF46081.1|  507|Drosophila melanogaster CG15769-PA
           protein.
          Length = 507

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 13/43 (30%), Positives = 19/43 (44%)
 Frame = +2

Query: 176 YIGAA*WXSPSKMPQIRLLRGIRPYSGQFET*NGTGEPLEYNW 304
           Y GA  +  P        L G+R Y G + +  G G+ + Y W
Sbjct: 365 YRGAHSFSEPESRAVCSFLSGMREYLGAYVSLGGYGQAITYPW 407


>AE014296-1278|AAF50545.3| 1166|Drosophila melanogaster CG7546-PB,
           isoform B protein.
          Length = 1166

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +1

Query: 388 GTCIIVLPHPYTKPDINCFLEVCKVLRKKFEVSIKFYNG 504
           G  ++ LP  Y +P+ N    VC +LR    + I+  NG
Sbjct: 851 GESLVYLPQ-YERPEYNSRDSVCNILRVSLRLIIELCNG 888


>AE014296-1277|AAF50546.2| 1332|Drosophila melanogaster CG7546-PA,
            isoform A protein.
          Length = 1332

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +1

Query: 388  GTCIIVLPHPYTKPDINCFLEVCKVLRKKFEVSIKFYNG 504
            G  ++ LP  Y +P+ N    VC +LR    + I+  NG
Sbjct: 1017 GESLVYLPQ-YERPEYNSRDSVCNILRVSLRLIIELCNG 1054


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,757,238
Number of Sequences: 53049
Number of extensions: 429485
Number of successful extensions: 1058
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1058
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2172596895
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)