Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0827
(561 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 24 1.2
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 23 2.8
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 23 2.8
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 23 2.8
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 23 2.8
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 23 2.8
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 23 2.8
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 23 2.8
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 23 2.8
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 23 2.8
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 23 2.8
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 23 2.8
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 23 2.8
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 23 2.8
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 23 2.8
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 23 2.8
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 23 2.8
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 23 2.8
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 23 2.8
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 23 2.8
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 23 2.8
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 23 2.8
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 23 2.8
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 23 2.8
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 23 2.8
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 23 2.8
S76958-1|AAB33933.1| 90|Apis mellifera olfactory receptor prot... 21 8.5
DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein. 21 8.5
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 23.8 bits (49), Expect = 1.2
Identities = 14/70 (20%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = -2
Query: 389 PYPPVCWNVNLNRNSLSFLNPCLASETCASYIRGALRFHFTFQTVQNMVEFL-VIIEFAA 213
PYP + +N+ L R +L + + SY+ L F+ + + + + +++
Sbjct: 221 PYPDIFFNITLRRKTLFYTVNLIVPCVSISYL-SVLAFYLPADSGEKIALCINILLSQTM 279
Query: 212 FYLATXITLP 183
F+L +P
Sbjct: 280 FFLLISEIIP 289
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 22.6 bits (46), Expect = 2.8
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3
Query: 21 VEKIDFEESKSRSP 62
+EK+ E SKSRSP
Sbjct: 72 IEKLGSERSKSRSP 85
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 22.6 bits (46), Expect = 2.8
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3
Query: 21 VEKIDFEESKSRSP 62
+EK+ E SKSRSP
Sbjct: 72 IEKLGSERSKSRSP 85
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.6 bits (46), Expect = 2.8
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3
Query: 21 VEKIDFEESKSRSP 62
+EK+ E SKSRSP
Sbjct: 72 IEKLGSERSKSRSP 85
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 22.6 bits (46), Expect = 2.8
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3
Query: 21 VEKIDFEESKSRSP 62
+EK+ E SKSRSP
Sbjct: 72 IEKLGSERSKSRSP 85
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 2.8
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3
Query: 21 VEKIDFEESKSRSP 62
+EK+ E SKSRSP
Sbjct: 72 IEKLGSERSKSRSP 85
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 2.8
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3
Query: 21 VEKIDFEESKSRSP 62
+EK+ E SKSRSP
Sbjct: 72 IEKLGSERSKSRSP 85
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 2.8
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3
Query: 21 VEKIDFEESKSRSP 62
+EK+ E SKSRSP
Sbjct: 72 IEKLGSERSKSRSP 85
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 2.8
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3
Query: 21 VEKIDFEESKSRSP 62
+EK+ E SKSRSP
Sbjct: 72 IEKLGSERSKSRSP 85
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 2.8
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3
Query: 21 VEKIDFEESKSRSP 62
+EK+ E SKSRSP
Sbjct: 72 IEKLGSERSKSRSP 85
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.6 bits (46), Expect = 2.8
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3
Query: 21 VEKIDFEESKSRSP 62
+EK+ E SKSRSP
Sbjct: 72 IEKLGSERSKSRSP 85
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 22.6 bits (46), Expect = 2.8
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3
Query: 21 VEKIDFEESKSRSP 62
+EK+ E SKSRSP
Sbjct: 72 IEKLGSERSKSRSP 85
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 22.6 bits (46), Expect = 2.8
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3
Query: 21 VEKIDFEESKSRSP 62
+EK+ E SKSRSP
Sbjct: 72 IEKLGSERSKSRSP 85
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 22.6 bits (46), Expect = 2.8
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3
Query: 21 VEKIDFEESKSRSP 62
+EK+ E SKSRSP
Sbjct: 72 IEKLGSERSKSRSP 85
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.6 bits (46), Expect = 2.8
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3
Query: 21 VEKIDFEESKSRSP 62
+EK+ E SKSRSP
Sbjct: 72 IEKLGSERSKSRSP 85
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.6 bits (46), Expect = 2.8
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3
Query: 21 VEKIDFEESKSRSP 62
+EK+ E SKSRSP
Sbjct: 72 IEKLGSERSKSRSP 85
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 22.6 bits (46), Expect = 2.8
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3
Query: 21 VEKIDFEESKSRSP 62
+EK+ E SKSRSP
Sbjct: 72 IEKLGSERSKSRSP 85
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.6 bits (46), Expect = 2.8
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3
Query: 21 VEKIDFEESKSRSP 62
+EK+ E SKSRSP
Sbjct: 72 IEKLGSERSKSRSP 85
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 22.6 bits (46), Expect = 2.8
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3
Query: 21 VEKIDFEESKSRSP 62
+EK+ E SKSRSP
Sbjct: 72 IEKLGSERSKSRSP 85
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.6 bits (46), Expect = 2.8
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3
Query: 21 VEKIDFEESKSRSP 62
+EK+ E SKSRSP
Sbjct: 72 IEKLGSERSKSRSP 85
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.6 bits (46), Expect = 2.8
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3
Query: 21 VEKIDFEESKSRSP 62
+EK+ E SKSRSP
Sbjct: 72 IEKLGSERSKSRSP 85
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 22.6 bits (46), Expect = 2.8
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3
Query: 21 VEKIDFEESKSRSP 62
+EK+ E SKSRSP
Sbjct: 72 IEKLGSERSKSRSP 85
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 22.6 bits (46), Expect = 2.8
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3
Query: 21 VEKIDFEESKSRSP 62
+EK+ E SKSRSP
Sbjct: 72 IEKLGSERSKSRSP 85
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 22.6 bits (46), Expect = 2.8
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3
Query: 21 VEKIDFEESKSRSP 62
+EK+ E SKSRSP
Sbjct: 72 IEKLGSERSKSRSP 85
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 22.6 bits (46), Expect = 2.8
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3
Query: 21 VEKIDFEESKSRSP 62
+EK+ E SKSRSP
Sbjct: 72 IEKLGSERSKSRSP 85
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 22.6 bits (46), Expect = 2.8
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3
Query: 21 VEKIDFEESKSRSP 62
+EK+ E SKSRSP
Sbjct: 72 IEKLGSERSKSRSP 85
>S76958-1|AAB33933.1| 90|Apis mellifera olfactory receptor
protein.
Length = 90
Score = 21.0 bits (42), Expect = 8.5
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -3
Query: 202 RLPLRCPNIIXHYLLALE 149
+LP PN+I HY L+
Sbjct: 25 QLPFCGPNVIDHYFRDLQ 42
>DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein.
Length = 145
Score = 21.0 bits (42), Expect = 8.5
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +3
Query: 183 GQRNGSRQVKCRKFDYYEEFDHILD 257
GQ +RQ+KC + +E+F + D
Sbjct: 61 GQWPETRQLKCYMYCLWEQFGLVDD 85
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,064
Number of Sequences: 438
Number of extensions: 3275
Number of successful extensions: 29
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16195212
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -