Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0826
         (528 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    25   1.6  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   4.8  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   6.3  
AY505417-1|AAR90328.1|  206|Anopheles gambiae superoxide dismuta...    23   8.4  
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            23   8.4  

>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = +3

Query: 246 LKGGEKSLRRGILSWKDYFPKGISVQTTFDLHDNTEW 356
           L+GG  S+   I +     P   S +  F LH+N E+
Sbjct: 599 LQGGNSSISLPIFAQNQRMPSEESHEFAFRLHENPEY 635


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 23.4 bits (48), Expect = 4.8
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = +1

Query: 4   HENRLVLRNENILYVVICYKTFYS 75
           HE++L+L NE+ + V+   +TF S
Sbjct: 774 HEDKLLLTNEDFVPVIEIDETFTS 797


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 23.0 bits (47), Expect = 6.3
 Identities = 6/20 (30%), Positives = 13/20 (65%)
 Frame = -3

Query: 229  QYVGRHRFGRNIWYWVILEP 170
            +Y+ +HR    +W++V  +P
Sbjct: 1157 RYIPKHRIQYKVWWFVTSQP 1176


>AY505417-1|AAR90328.1|  206|Anopheles gambiae superoxide dismutase
           1 protein.
          Length = 206

 Score = 22.6 bits (46), Expect = 8.4
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 361 NCHSVLSCKSKVV*TEIP 308
           NC +VL C+SK    ++P
Sbjct: 23  NCSAVLGCRSKHTLPDLP 40


>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 22.6 bits (46), Expect = 8.4
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = -3

Query: 286 DNIPLRRDFSPPFNDVMPFQYVGRHRFGRNIWYWVILEPQIILLQS 149
           D+IP   +FS    D  PFQ++ + R       W+   P+ +LL +
Sbjct: 483 DHIPAPDEFSLLAQDGTPFQHLHQLRELDLSSNWLTAVPRDLLLNT 528


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 596,215
Number of Sequences: 2352
Number of extensions: 12738
Number of successful extensions: 23
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 48628785
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)