Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0826
(528 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin con... 97 9e-21
AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin con... 76 2e-14
U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin conju... 54 8e-08
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 38 0.004
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 38 0.004
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 36 0.014
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 36 0.014
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 36 0.014
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 35 0.031
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 34 0.072
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 33 0.096
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 33 0.13
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 33 0.13
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 32 0.29
Z81473-7|CAB60992.2| 661|Caenorhabditis elegans Hypothetical pr... 28 3.6
Z81063-8|CAB61013.2| 661|Caenorhabditis elegans Hypothetical pr... 28 3.6
AF492701-1|AAM49753.1| 647|Caenorhabditis elegans SPE-9 protein. 28 3.6
AF492700-1|AAM49752.1| 647|Caenorhabditis elegans SPE-9 protein. 28 3.6
AF492699-1|AAM49751.1| 647|Caenorhabditis elegans SPE-9 protein. 28 3.6
AF492698-1|AAM49750.1| 647|Caenorhabditis elegans SPE-9 protein. 28 3.6
AF492697-1|AAM49749.1| 647|Caenorhabditis elegans SPE-9 protein. 28 3.6
AF492696-1|AAM49748.1| 647|Caenorhabditis elegans SPE-9 protein. 28 3.6
AF492695-1|AAM49747.1| 647|Caenorhabditis elegans SPE-9 protein. 28 3.6
AF492694-1|AAM49746.1| 647|Caenorhabditis elegans SPE-9 protein. 28 3.6
AF492693-1|AAM49745.1| 647|Caenorhabditis elegans SPE-9 protein. 28 3.6
AF492692-1|AAM49744.1| 647|Caenorhabditis elegans SPE-9 protein. 28 3.6
AF492690-1|AAM49742.1| 647|Caenorhabditis elegans SPE-9 protein. 28 3.6
AF492688-1|AAM49741.1| 647|Caenorhabditis elegans SPE-9 protein. 28 3.6
AF492687-1|AAM49740.1| 647|Caenorhabditis elegans SPE-9 protein. 28 3.6
AF492686-1|AAM49739.1| 647|Caenorhabditis elegans SPE-9 protein. 28 3.6
AF049327-1|AAC38980.1| 661|Caenorhabditis elegans sperm transme... 28 3.6
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 28 3.6
Z95309-1|CAB08559.2| 446|Caenorhabditis elegans Hypothetical pr... 27 6.3
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 27 6.3
AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 27 6.3
>AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein26 protein.
Length = 203
Score = 96.7 bits (230), Expect = 9e-21
Identities = 44/84 (52%), Positives = 58/84 (69%)
Frame = +3
Query: 276 GILSWKDYFPKGISVQTTFDLHDNTEWQFKTNTRLCLSITDFHPDTWNPAWSISTILTGL 455
GI K FPK + L +F+TNTRLCLSI+D+HPDTWNPAW++STI+TGL
Sbjct: 55 GIYMGKLLFPKDFPFKPPAILMLTPNGRFQTNTRLCLSISDYHPDTWNPAWTVSTIITGL 114
Query: 456 LSFMLEKTPTLGSIETSRYQKRCL 527
+SFM + PTLGS+ TS +++ L
Sbjct: 115 MSFMNDNQPTLGSLVTSESERKLL 138
Score = 65.3 bits (152), Expect = 3e-11
Identities = 27/47 (57%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
Frame = +1
Query: 253 AEKSPYEGGYYHGKIIFPREFPFKPPSIYMITPNGS-SRQTHDCASV 390
A K+PYEGG Y GK++FP++FPFKPP+I M+TPNG T C S+
Sbjct: 47 APKTPYEGGIYMGKLLFPKDFPFKPPAILMLTPNGRFQTNTRLCLSI 93
Score = 62.5 bits (145), Expect = 2e-10
Identities = 28/61 (45%), Positives = 39/61 (63%)
Frame = +2
Query: 134 TGATSRLKQDYLRLKNDPVPYVTAEPVPSNILEWHYVVKGRRKVPTKGDIIMERLFSQGN 313
T A RLK+DY RL +PVP++ A P+ +NILEW Y++ G K P +G I M +L +
Sbjct: 7 TVALQRLKKDYQRLLKEPVPFMKAAPLETNILEWRYIIIGAPKTPYEGGIYMGKLLFPKD 66
Query: 314 F 316
F
Sbjct: 67 F 67
>AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein15 protein.
Length = 218
Score = 75.8 bits (178), Expect = 2e-14
Identities = 31/55 (56%), Positives = 42/55 (76%)
Frame = +3
Query: 357 QFKTNTRLCLSITDFHPDTWNPAWSISTILTGLLSFMLEKTPTLGSIETSRYQKR 521
+F+TNTRLCLSI+D+HP++WNP W++S IL GL SFM E +P GSI + +R
Sbjct: 93 RFQTNTRLCLSISDYHPESWNPGWTVSAILIGLHSFMNENSPAAGSIAGTPQDQR 147
Score = 53.6 bits (123), Expect = 8e-08
Identities = 23/44 (52%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = +1
Query: 262 SPYEGGYYHGKIIFPREFPFKPPSIYMITPNGS-SRQTHDCASV 390
+P+ GGYY GK+IF FP+ PP+I MITPNG T C S+
Sbjct: 61 TPFYGGYYWGKVIFKENFPWSPPAITMITPNGRFQTNTRLCLSI 104
Score = 53.2 bits (122), Expect = 1e-07
Identities = 26/71 (36%), Positives = 37/71 (52%)
Frame = +2
Query: 104 IHVNMAKTKVTGATSRLKQDYLRLKNDPVPYVTAEPVPSNILEWHYVVKGRRKVPTKGDI 283
+ V A T + A RL++DY +L DPV + A P NILEWHY ++G P G
Sbjct: 8 VSVPAAGTASSSAVRRLQKDYAKLMQDPVDGIKALPNEDNILEWHYCLRGSPDTPFYGGY 67
Query: 284 IMERLFSQGNF 316
++ + NF
Sbjct: 68 YWGKVIFKENF 78
>U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein6 protein.
Length = 314
Score = 53.6 bits (123), Expect = 8e-08
Identities = 18/30 (60%), Positives = 26/30 (86%)
Frame = +1
Query: 268 YEGGYYHGKIIFPREFPFKPPSIYMITPNG 357
+EGG YHG+IIFP ++P KPP++ ++TPNG
Sbjct: 53 FEGGIYHGRIIFPADYPMKPPNLILLTPNG 82
Score = 53.6 bits (123), Expect = 8e-08
Identities = 24/50 (48%), Positives = 35/50 (70%), Gaps = 2/50 (4%)
Frame = +3
Query: 357 QFKTNTRLCLSITDFHPDTWNPAWSISTILTGLLSFMLEKTP--TLGSIE 500
+F+ N ++CLSI+ +HP+TW P+WSI T L L+ F L TP LGS++
Sbjct: 83 RFELNKKVCLSISGYHPETWLPSWSIRTALLALIGF-LPSTPGGALGSLD 131
Score = 33.5 bits (73), Expect = 0.096
Identities = 17/64 (26%), Positives = 31/64 (48%)
Frame = +2
Query: 125 TKVTGATSRLKQDYLRLKNDPVPYVTAEPVPSNILEWHYVVKGRRKVPTKGDIIMERLFS 304
TK G RL ++ + L+ P A+P+ N+ EWH+ ++G +G I R+
Sbjct: 7 TKNAGVR-RLMKEAMELRQ-PTEMYHAQPMEDNLFEWHFTIRGTLGTDFEGGIYHGRIIF 64
Query: 305 QGNF 316
++
Sbjct: 65 PADY 68
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 37.9 bits (84), Expect = 0.004
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +1
Query: 259 KSPYEGGYYHGKIIFPREFPFKPPSIYMIT 348
+SPY+GG + I FP ++PFKPP + T
Sbjct: 42 ESPYQGGVFFLTIHFPTDYPFKPPKVAFTT 71
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 37.9 bits (84), Expect = 0.004
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +1
Query: 259 KSPYEGGYYHGKIIFPREFPFKPPSIYMIT 348
+SPY+GG + I FP ++PFKPP + T
Sbjct: 42 ESPYQGGVFFLTIHFPTDYPFKPPKVAFTT 71
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 36.3 bits (80), Expect = 0.014
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +2
Query: 134 TGATSRLKQDYLRLKNDPVPYVTAEPVPSNILEWHYVVKGRRKVP 268
T + RL +D+ +L+ DP V+ P NIL W ++ G ++ P
Sbjct: 3 TPSRRRLMRDFKKLQEDPPAGVSGAPTEDNILTWEAIIFGPQETP 47
Score = 29.1 bits (62), Expect = 2.1
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +1
Query: 256 EKSPYEGGYYHGKIIFPREFPFKPPSIYMIT 348
+++P+E G + + F E+P KPP++ I+
Sbjct: 44 QETPFEDGTFKLSLEFTEEYPNKPPTVKFIS 74
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 36.3 bits (80), Expect = 0.014
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +2
Query: 134 TGATSRLKQDYLRLKNDPVPYVTAEPVPSNILEWHYVVKGRRKVP 268
T + RL +D+ +L+ DP V+ P NIL W ++ G ++ P
Sbjct: 3 TPSRRRLMRDFKKLQEDPPAGVSGAPTEDNILTWEAIIFGPQETP 47
Score = 29.1 bits (62), Expect = 2.1
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +1
Query: 256 EKSPYEGGYYHGKIIFPREFPFKPPSIYMIT 348
+++P+E G + + F E+P KPP++ I+
Sbjct: 44 QETPFEDGTFKLSLEFTEEYPNKPPTVKFIS 74
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 36.3 bits (80), Expect = 0.014
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 259 KSPYEGGYYHGKIIFPREFPFKPPSIYMIT 348
K+ Y+GGY+ I FP +P+ PPS+ T
Sbjct: 51 KTLYQGGYFKASIRFPSNYPYSPPSMKFTT 80
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 35.1 bits (77), Expect = 0.031
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 4/46 (8%)
Frame = +1
Query: 268 YEGGYYHGKIIFPREFPFKPPSIYMIT----PNGSSRQTHDCASVL 393
YEGG++ + FPR++P KPP + I+ PN ++ + C S+L
Sbjct: 48 YEGGFFKAILDFPRDYPQKPPKMKFISEIWHPN-IDKEGNVCISIL 92
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 33.9 bits (74), Expect = 0.072
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Frame = +1
Query: 262 SPYEGGYYHGKIIFPREFPFKPPSIYMIT----PNGSSRQTHDCASVLQ 396
+PY GG + I P ++PF PP++ T PN SS+ C +L+
Sbjct: 49 TPYAGGMFDLDIKIPDQYPFSPPNVKFSTKIWHPNVSSQTGVICLDILK 97
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 33.5 bits (73), Expect = 0.096
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 256 EKSPYEGGYYHGKIIFPREFPFKPPSI 336
+K PY G + I FP ++PFKPP +
Sbjct: 42 DKEPYNKGAFKVGITFPVDYPFKPPKV 68
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 33.1 bits (72), Expect = 0.13
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 256 EKSPYEGGYYHGKIIFPREFPFKPPSIYMIT 348
E++PYEGG + I +PFK P++ IT
Sbjct: 389 EETPYEGGIFELDIKIGESYPFKAPTVKFIT 419
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 33.1 bits (72), Expect = 0.13
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 256 EKSPYEGGYYHGKIIFPREFPFKPPSI 336
E +PY GG + K+ P +PF+PP +
Sbjct: 61 EGTPYAGGTFEIKVDIPEHYPFEPPKV 87
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 31.9 bits (69), Expect = 0.29
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +1
Query: 256 EKSPYEGGYYHGKIIFPREFPFKPPS-IYMITPNGSSR 366
+ +PY G + I FP +PF PP ++ T +G+ R
Sbjct: 453 DDTPYANGLFEFDIFFPTGYPFSPPKCAFLTTGSGNVR 490
>Z81473-7|CAB60992.2| 661|Caenorhabditis elegans Hypothetical
protein C17D12.6 protein.
Length = 661
Score = 28.3 bits (60), Expect = 3.6
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 10 NRLVLRNENILYVVICYKTFYSKNCKHSKVNNSCE 114
NR +EN + IC T Y K C+H +CE
Sbjct: 65 NRGKCLHENGNFYCICPVTHYGKTCEHVSDQTNCE 99
>Z81063-8|CAB61013.2| 661|Caenorhabditis elegans Hypothetical
protein C17D12.6 protein.
Length = 661
Score = 28.3 bits (60), Expect = 3.6
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 10 NRLVLRNENILYVVICYKTFYSKNCKHSKVNNSCE 114
NR +EN + IC T Y K C+H +CE
Sbjct: 65 NRGKCLHENGNFYCICPVTHYGKTCEHVSDQTNCE 99
>AF492701-1|AAM49753.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 28.3 bits (60), Expect = 3.6
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 10 NRLVLRNENILYVVICYKTFYSKNCKHSKVNNSCE 114
NR +EN + IC T Y K C+H +CE
Sbjct: 51 NRGKCLHENGNFYCICPVTHYGKTCEHVSDQTNCE 85
>AF492700-1|AAM49752.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 28.3 bits (60), Expect = 3.6
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 10 NRLVLRNENILYVVICYKTFYSKNCKHSKVNNSCE 114
NR +EN + IC T Y K C+H +CE
Sbjct: 51 NRGKCLHENGNFYCICPVTHYGKTCEHVSDQTNCE 85
>AF492699-1|AAM49751.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 28.3 bits (60), Expect = 3.6
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 10 NRLVLRNENILYVVICYKTFYSKNCKHSKVNNSCE 114
NR +EN + IC T Y K C+H +CE
Sbjct: 51 NRGKCLHENGNFYCICPVTHYGKTCEHVSDQTNCE 85
>AF492698-1|AAM49750.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 28.3 bits (60), Expect = 3.6
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 10 NRLVLRNENILYVVICYKTFYSKNCKHSKVNNSCE 114
NR +EN + IC T Y K C+H +CE
Sbjct: 51 NRGKCLHENGNFYCICPVTHYGKTCEHVSDQTNCE 85
>AF492697-1|AAM49749.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 28.3 bits (60), Expect = 3.6
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 10 NRLVLRNENILYVVICYKTFYSKNCKHSKVNNSCE 114
NR +EN + IC T Y K C+H +CE
Sbjct: 51 NRGKCLHENGNFYCICPVTHYGKTCEHVSDQTNCE 85
>AF492696-1|AAM49748.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 28.3 bits (60), Expect = 3.6
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 10 NRLVLRNENILYVVICYKTFYSKNCKHSKVNNSCE 114
NR +EN + IC T Y K C+H +CE
Sbjct: 51 NRGKCLHENGNFYCICPVTHYGKTCEHVSDQTNCE 85
>AF492695-1|AAM49747.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 28.3 bits (60), Expect = 3.6
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 10 NRLVLRNENILYVVICYKTFYSKNCKHSKVNNSCE 114
NR +EN + IC T Y K C+H +CE
Sbjct: 51 NRGKCLHENGNFYCICPVTHYGKTCEHVSDQTNCE 85
>AF492694-1|AAM49746.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 28.3 bits (60), Expect = 3.6
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 10 NRLVLRNENILYVVICYKTFYSKNCKHSKVNNSCE 114
NR +EN + IC T Y K C+H +CE
Sbjct: 51 NRGKCLHENGNFYCICPVTHYGKTCEHVSDQTNCE 85
>AF492693-1|AAM49745.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 28.3 bits (60), Expect = 3.6
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 10 NRLVLRNENILYVVICYKTFYSKNCKHSKVNNSCE 114
NR +EN + IC T Y K C+H +CE
Sbjct: 51 NRGKCLHENGNFYCICPVTHYGKTCEHVSDQTNCE 85
>AF492692-1|AAM49744.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 28.3 bits (60), Expect = 3.6
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 10 NRLVLRNENILYVVICYKTFYSKNCKHSKVNNSCE 114
NR +EN + IC T Y K C+H +CE
Sbjct: 51 NRGKCLHENGNFYCICPVTHYGKTCEHVSDQTNCE 85
>AF492690-1|AAM49742.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 28.3 bits (60), Expect = 3.6
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 10 NRLVLRNENILYVVICYKTFYSKNCKHSKVNNSCE 114
NR +EN + IC T Y K C+H +CE
Sbjct: 51 NRGKCLHENGNFYCICPVTHYGKTCEHVSDQTNCE 85
>AF492688-1|AAM49741.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 28.3 bits (60), Expect = 3.6
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 10 NRLVLRNENILYVVICYKTFYSKNCKHSKVNNSCE 114
NR +EN + IC T Y K C+H +CE
Sbjct: 51 NRGKCLHENGNFYCICPVTHYGKTCEHVSDQTNCE 85
>AF492687-1|AAM49740.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 28.3 bits (60), Expect = 3.6
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 10 NRLVLRNENILYVVICYKTFYSKNCKHSKVNNSCE 114
NR +EN + IC T Y K C+H +CE
Sbjct: 51 NRGKCLHENGNFYCICPVTHYGKTCEHVSDQTNCE 85
>AF492686-1|AAM49739.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 28.3 bits (60), Expect = 3.6
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 10 NRLVLRNENILYVVICYKTFYSKNCKHSKVNNSCE 114
NR +EN + IC T Y K C+H +CE
Sbjct: 51 NRGKCLHENGNFYCICPVTHYGKTCEHVSDQTNCE 85
>AF049327-1|AAC38980.1| 661|Caenorhabditis elegans sperm
transmembrane protein protein.
Length = 661
Score = 28.3 bits (60), Expect = 3.6
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 10 NRLVLRNENILYVVICYKTFYSKNCKHSKVNNSCE 114
NR +EN + IC T Y K C+H +CE
Sbjct: 65 NRGKCLHENGNFYCICPVTHYGKTCEHVSDQTNCE 99
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 28.3 bits (60), Expect = 3.6
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +1
Query: 256 EKSPYEGGYYHGKIIFPREFPFKPPSIYMIT 348
+ SP+ GG + ++ P E+P P + +T
Sbjct: 44 DDSPFAGGVFKLELFLPEEYPMAAPKVRFMT 74
>Z95309-1|CAB08559.2| 446|Caenorhabditis elegans Hypothetical
protein H36L18.1 protein.
Length = 446
Score = 27.5 bits (58), Expect = 6.3
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +3
Query: 177 RMTQYHMLRPNLCRPTYWNGITSLKGGEKSLRRG 278
+ +++H+ R LC Y + +T+LK G RG
Sbjct: 170 KASEHHIWRSELCTKPYLDAVTTLKNGTILAFRG 203
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 27.5 bits (58), Expect = 6.3
Identities = 8/27 (29%), Positives = 17/27 (62%)
Frame = +1
Query: 256 EKSPYEGGYYHGKIIFPREFPFKPPSI 336
E++ + G + +I FP+++P PP +
Sbjct: 45 EETCFANGVFPARITFPQDYPLSPPKM 71
>AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein8 protein.
Length = 221
Score = 27.5 bits (58), Expect = 6.3
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 268 YEGGYYHGKIIFPREFPFKPPSI 336
YE G + ++ P ++PFK PSI
Sbjct: 47 YENGVWRIRVDMPDKYPFKSPSI 69
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,062,571
Number of Sequences: 27780
Number of extensions: 286815
Number of successful extensions: 888
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 888
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1038911524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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