Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0825
(705 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC054027-1|AAH54027.1| 370|Homo sapiens actin related protein 2... 124 4e-28
BC047889-1|AAH47889.2| 370|Homo sapiens actin related protein 2... 124 4e-28
BC039594-1|AAH39594.2| 370|Homo sapiens actin related protein 2... 124 4e-28
AK223015-1|BAD96735.1| 365|Homo sapiens actin related protein 2... 124 4e-28
AB209059-1|BAD92296.1| 401|Homo sapiens actin related protein 2... 124 4e-28
Y08999-1|CAA70203.1| 370|Homo sapiens Sop2p-like protein protein. 120 4e-27
BC007555-1|AAH07555.1| 372|Homo sapiens actin related protein 2... 119 9e-27
BC002988-1|AAH02988.2| 372|Homo sapiens actin related protein 2... 119 9e-27
BC002562-1|AAH02562.1| 372|Homo sapiens actin related protein 2... 119 9e-27
AF006084-1|AAB64189.1| 372|Homo sapiens p41-Arc protein. 119 9e-27
AC004834-1|AAS00381.1| 166|Homo sapiens unknown protein. 53 1e-06
Y12781-1|CAA73319.1| 577|Homo sapiens transducin (beta) like 1 ... 31 4.0
BC052304-1|AAH52304.1| 577|Homo sapiens transducin (beta)-like ... 31 4.0
BC032708-1|AAH32708.1| 526|Homo sapiens TBL1X protein protein. 31 4.0
AB209608-1|BAD92845.1| 540|Homo sapiens transducin beta-like 1X... 31 4.0
AF217525-1|AAF27525.1| 2012|Homo sapiens Down syndrome cell adhe... 31 5.3
AF023450-1|AAC17967.1| 1571|Homo sapiens Down syndrome cell adhe... 31 5.3
AF023449-1|AAC17966.1| 1896|Homo sapiens Down syndrome cell adhe... 31 5.3
AB209136-1|BAD92373.1| 2023|Homo sapiens Down syndrome cell adhe... 31 5.3
AF193594-1|AAP97280.1| 357|Homo sapiens MD6b protein. 30 9.3
>BC054027-1|AAH54027.1| 370|Homo sapiens actin related protein 2/3
complex, subunit 1A, 41kDa protein.
Length = 370
Score = 124 bits (298), Expect = 4e-28
Identities = 53/83 (63%), Positives = 68/83 (81%)
Frame = +1
Query: 7 EPIRSTVTSIDWHPNNILLVAGSADFKVRVFSAYIKDIEDQPGPNVWGSKLPLGQLLAEF 186
+PIRSTV S+DWHPNN+LL AGS DFK RVFSAYIK+++++P WGSK+P GQL++EF
Sbjct: 139 KPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVDEKPASTPWGSKMPFGQLMSEF 198
Query: 187 PNSPSGGGWVHSVSFSADGNKVA 255
S + GGWVH VSFSA G+++A
Sbjct: 199 GGSGT-GGWVHGVSFSASGSRLA 220
Score = 81.8 bits (193), Expect = 2e-15
Identities = 35/86 (40%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 WVAHDSSINVTDATKGRAVIKLKTEYLPFLGCSWITNNSLIVAGHSCIPLLYCHDGDD-I 431
WV+HDS+++V DA+K V LKTE+LP L S+++ NS++ AGH C P+L+ +D +
Sbjct: 221 WVSHDSTVSVADASKSVQVSTLKTEFLPLLSVSFVSENSVVAAGHDCCPMLFNYDDRGCL 280
Query: 432 KYVAKLDNTQRNESGGLSAMKKFQSL 509
+V+KLD +++ +SAM++F+++
Sbjct: 281 TFVSKLDIPKQSIQRNMSAMERFRNM 306
Score = 52.0 bits (119), Expect = 2e-06
Identities = 22/64 (34%), Positives = 39/64 (60%)
Frame = +2
Query: 506 LDRHARIETSDTFLDSIHQNAISCIHIFKGT*SRTNKFSTSGLDGQLSYWDLGTLGGHFK 685
+D+ A E +T L+++HQN+I+ + I++ KF T+G+DG ++ WD TL +
Sbjct: 306 MDKRATTEDRNTALETLHQNSITQVSIYEVDKQDCRKFCTTGIDGAMTIWDFKTLESSIQ 365
Query: 686 GSRL 697
G R+
Sbjct: 366 GLRI 369
>BC047889-1|AAH47889.2| 370|Homo sapiens actin related protein 2/3
complex, subunit 1A, 41kDa protein.
Length = 370
Score = 124 bits (298), Expect = 4e-28
Identities = 53/83 (63%), Positives = 68/83 (81%)
Frame = +1
Query: 7 EPIRSTVTSIDWHPNNILLVAGSADFKVRVFSAYIKDIEDQPGPNVWGSKLPLGQLLAEF 186
+PIRSTV S+DWHPNN+LL AGS DFK RVFSAYIK+++++P WGSK+P GQL++EF
Sbjct: 139 KPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVDEKPASTPWGSKMPFGQLMSEF 198
Query: 187 PNSPSGGGWVHSVSFSADGNKVA 255
S + GGWVH VSFSA G+++A
Sbjct: 199 GGSGT-GGWVHGVSFSASGSRLA 220
Score = 81.8 bits (193), Expect = 2e-15
Identities = 35/86 (40%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 WVAHDSSINVTDATKGRAVIKLKTEYLPFLGCSWITNNSLIVAGHSCIPLLYCHDGDD-I 431
WV+HDS+++V DA+K V LKTE+LP L S+++ NS++ AGH C P+L+ +D +
Sbjct: 221 WVSHDSTVSVADASKSVQVSTLKTEFLPLLSVSFVSENSVVAAGHDCCPMLFNYDDRGCL 280
Query: 432 KYVAKLDNTQRNESGGLSAMKKFQSL 509
+V+KLD +++ +SAM++F+++
Sbjct: 281 TFVSKLDIPKQSIQRNMSAMERFRNM 306
Score = 52.0 bits (119), Expect = 2e-06
Identities = 22/64 (34%), Positives = 39/64 (60%)
Frame = +2
Query: 506 LDRHARIETSDTFLDSIHQNAISCIHIFKGT*SRTNKFSTSGLDGQLSYWDLGTLGGHFK 685
+D+ A E +T L+++HQN+I+ + I++ KF T+G+DG ++ WD TL +
Sbjct: 306 MDKRATTEDRNTALETLHQNSITQVSIYEVDKQDCRKFCTTGIDGAMTIWDFKTLESSIQ 365
Query: 686 GSRL 697
G R+
Sbjct: 366 GLRI 369
>BC039594-1|AAH39594.2| 370|Homo sapiens actin related protein 2/3
complex, subunit 1A, 41kDa protein.
Length = 370
Score = 124 bits (298), Expect = 4e-28
Identities = 53/83 (63%), Positives = 68/83 (81%)
Frame = +1
Query: 7 EPIRSTVTSIDWHPNNILLVAGSADFKVRVFSAYIKDIEDQPGPNVWGSKLPLGQLLAEF 186
+PIRSTV S+DWHPNN+LL AGS DFK RVFSAYIK+++++P WGSK+P GQL++EF
Sbjct: 139 KPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVDEKPASTPWGSKMPFGQLMSEF 198
Query: 187 PNSPSGGGWVHSVSFSADGNKVA 255
S + GGWVH VSFSA G+++A
Sbjct: 199 GGSGT-GGWVHGVSFSASGSRLA 220
Score = 81.8 bits (193), Expect = 2e-15
Identities = 35/86 (40%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 WVAHDSSINVTDATKGRAVIKLKTEYLPFLGCSWITNNSLIVAGHSCIPLLYCHDGDD-I 431
WV+HDS+++V DA+K V LKTE+LP L S+++ NS++ AGH C P+L+ +D +
Sbjct: 221 WVSHDSTVSVADASKSVQVSTLKTEFLPLLSVSFVSENSVVAAGHDCCPMLFNYDDRGCL 280
Query: 432 KYVAKLDNTQRNESGGLSAMKKFQSL 509
+V+KLD +++ +SAM++F+++
Sbjct: 281 TFVSKLDIPKQSIQRNMSAMERFRNM 306
Score = 52.0 bits (119), Expect = 2e-06
Identities = 22/64 (34%), Positives = 39/64 (60%)
Frame = +2
Query: 506 LDRHARIETSDTFLDSIHQNAISCIHIFKGT*SRTNKFSTSGLDGQLSYWDLGTLGGHFK 685
+D+ A E +T L+++HQN+I+ + I++ KF T+G+DG ++ WD TL +
Sbjct: 306 MDKRATTEDRNTALETLHQNSITQVSIYEVDKQDCRKFCTTGIDGAMTIWDFKTLESSIQ 365
Query: 686 GSRL 697
G R+
Sbjct: 366 GLRI 369
>AK223015-1|BAD96735.1| 365|Homo sapiens actin related protein 2/3
complex subunit 1A variant protein.
Length = 365
Score = 124 bits (298), Expect = 4e-28
Identities = 53/83 (63%), Positives = 68/83 (81%)
Frame = +1
Query: 7 EPIRSTVTSIDWHPNNILLVAGSADFKVRVFSAYIKDIEDQPGPNVWGSKLPLGQLLAEF 186
+PIRSTV S+DWHPNN+LL AGS DFK RVFSAYIK+++++P WGSK+P GQL++EF
Sbjct: 134 KPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVDEKPASTPWGSKMPFGQLMSEF 193
Query: 187 PNSPSGGGWVHSVSFSADGNKVA 255
S + GGWVH VSFSA G+++A
Sbjct: 194 GGSGT-GGWVHGVSFSASGSRLA 215
Score = 82.2 bits (194), Expect = 2e-15
Identities = 35/86 (40%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 WVAHDSSINVTDATKGRAVIKLKTEYLPFLGCSWITNNSLIVAGHSCIPLLYCHDGDD-I 431
WV+HDS+++V DA+K V LKTE+LP L S+++ NS++ AGH C P+L+ +D +
Sbjct: 216 WVSHDSTVSVADASKSVQVSTLKTEFLPLLSVSFVSENSVVAAGHDCCPMLFNYDDHGCL 275
Query: 432 KYVAKLDNTQRNESGGLSAMKKFQSL 509
+V+KLD +++ +SAM++F+++
Sbjct: 276 TFVSKLDIPKQSIQRNMSAMERFRNM 301
Score = 52.0 bits (119), Expect = 2e-06
Identities = 22/64 (34%), Positives = 39/64 (60%)
Frame = +2
Query: 506 LDRHARIETSDTFLDSIHQNAISCIHIFKGT*SRTNKFSTSGLDGQLSYWDLGTLGGHFK 685
+D+ A E +T L+++HQN+I+ + I++ KF T+G+DG ++ WD TL +
Sbjct: 301 MDKRATTEDRNTALETLHQNSITQVSIYEVDKQDCRKFCTTGIDGAMTIWDFKTLESSIQ 360
Query: 686 GSRL 697
G R+
Sbjct: 361 GLRI 364
>AB209059-1|BAD92296.1| 401|Homo sapiens actin related protein 2/3
complex subunit 1A variant protein.
Length = 401
Score = 124 bits (298), Expect = 4e-28
Identities = 53/83 (63%), Positives = 68/83 (81%)
Frame = +1
Query: 7 EPIRSTVTSIDWHPNNILLVAGSADFKVRVFSAYIKDIEDQPGPNVWGSKLPLGQLLAEF 186
+PIRSTV S+DWHPNN+LL AGS DFK RVFSAYIK+++++P WGSK+P GQL++EF
Sbjct: 170 KPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVDEKPASTPWGSKMPFGQLMSEF 229
Query: 187 PNSPSGGGWVHSVSFSADGNKVA 255
S + GGWVH VSFSA G+++A
Sbjct: 230 GGSGT-GGWVHGVSFSASGSRLA 251
Score = 81.8 bits (193), Expect = 2e-15
Identities = 35/86 (40%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 WVAHDSSINVTDATKGRAVIKLKTEYLPFLGCSWITNNSLIVAGHSCIPLLYCHDGDD-I 431
WV+HDS+++V DA+K V LKTE+LP L S+++ NS++ AGH C P+L+ +D +
Sbjct: 252 WVSHDSTVSVADASKSVQVSTLKTEFLPLLSVSFVSENSVVAAGHDCCPMLFNYDDRGCL 311
Query: 432 KYVAKLDNTQRNESGGLSAMKKFQSL 509
+V+KLD +++ +SAM++F+++
Sbjct: 312 TFVSKLDIPKQSIQRNMSAMERFRNM 337
Score = 48.4 bits (110), Expect = 2e-05
Identities = 20/55 (36%), Positives = 35/55 (63%)
Frame = +2
Query: 506 LDRHARIETSDTFLDSIHQNAISCIHIFKGT*SRTNKFSTSGLDGQLSYWDLGTL 670
+D+ A E +T L+++HQN+I+ + I++ KF T+G+DG ++ WD TL
Sbjct: 337 MDKRATTEDRNTALETLHQNSITQVSIYEVDKQDCRKFCTTGIDGAMTIWDFKTL 391
>Y08999-1|CAA70203.1| 370|Homo sapiens Sop2p-like protein protein.
Length = 370
Score = 120 bits (290), Expect = 4e-27
Identities = 52/83 (62%), Positives = 67/83 (80%)
Frame = +1
Query: 7 EPIRSTVTSIDWHPNNILLVAGSADFKVRVFSAYIKDIEDQPGPNVWGSKLPLGQLLAEF 186
+PIRSTV S+DWHPNN+LL AGS DFK RVFSAYIK+++++ WGSK+P GQL++EF
Sbjct: 139 KPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVDEKKASTPWGSKMPFGQLMSEF 198
Query: 187 PNSPSGGGWVHSVSFSADGNKVA 255
S + GGWVH VSFSA G+++A
Sbjct: 199 GGSGT-GGWVHGVSFSASGSRLA 220
Score = 82.6 bits (195), Expect = 1e-15
Identities = 35/86 (40%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 WVAHDSSINVTDATKGRAVIKLKTEYLPFLGCSWITNNSLIVAGHSCIPLLYCHDGDD-I 431
WV+HDS+++V DA+K V LKTE+LP L S+++ NS++ AGH C P+L+ +D +
Sbjct: 221 WVSHDSTVSVADASKSVQVSTLKTEFLPLLSVSFVSENSVVAAGHDCCPMLFIYDDRGCL 280
Query: 432 KYVAKLDNTQRNESGGLSAMKKFQSL 509
+V+KLD +++ +SAM++F+++
Sbjct: 281 TFVSKLDIPKQSIQRNMSAMERFRNM 306
Score = 52.0 bits (119), Expect = 2e-06
Identities = 22/64 (34%), Positives = 39/64 (60%)
Frame = +2
Query: 506 LDRHARIETSDTFLDSIHQNAISCIHIFKGT*SRTNKFSTSGLDGQLSYWDLGTLGGHFK 685
+D+ A E +T L+++HQN+I+ + I++ KF T+G+DG ++ WD TL +
Sbjct: 306 MDKRATTEDRNTALETLHQNSITQVSIYEVDKQDCRKFCTTGIDGAMTIWDFKTLESSIQ 365
Query: 686 GSRL 697
G R+
Sbjct: 366 GLRI 369
>BC007555-1|AAH07555.1| 372|Homo sapiens actin related protein 2/3
complex, subunit 1B, 41kDa protein.
Length = 372
Score = 119 bits (287), Expect = 9e-27
Identities = 52/83 (62%), Positives = 65/83 (78%)
Frame = +1
Query: 7 EPIRSTVTSIDWHPNNILLVAGSADFKVRVFSAYIKDIEDQPGPNVWGSKLPLGQLLAEF 186
+PIRSTV S+DWHPNN+LL AGS DFK R+FSAYIK++E++P P WGSK+P G+L+ E
Sbjct: 139 KPIRSTVLSLDWHPNNVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFE- 197
Query: 187 PNSPSGGGWVHSVSFSADGNKVA 255
S S GWVH V FSA G++VA
Sbjct: 198 --SSSSCGWVHGVCFSASGSRVA 218
Score = 76.2 bits (179), Expect = 1e-13
Identities = 35/87 (40%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
Frame = +3
Query: 255 WVAHDSSINVTDATKGRAVIKLKTEYLPFLGCSWITNNSLIVAGHSCIPLLYCHD--GDD 428
WV+HDS++ + DA K AV L +E LP L ++IT+NSL+ AGH C P+L+ +D
Sbjct: 219 WVSHDSTVCLADADKKMAVATLASETLPLLALTFITDNSLVAAGHDCFPVLFTYDAAAGM 278
Query: 429 IKYVAKLDNTQRNESGGLSAMKKFQSL 509
+ + +LD +++ GL+A ++FQ+L
Sbjct: 279 LSFGGRLDVPKQSSQRGLTARERFQNL 305
Score = 46.4 bits (105), Expect = 1e-04
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Frame = +2
Query: 476 GTVCYEEVPVLDRHARIE---TSDTFLDSIHQNAISCIHIFKGT*SRTNKFSTSGLDGQL 646
G E LD+ A E + LDS+H+N++S I + G ++ ++F T+G+DG +
Sbjct: 295 GLTARERFQNLDKKASSEGGTAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGM 354
Query: 647 SYWDLGTLGGHFKGSRL 697
S WD+ +L K ++
Sbjct: 355 SIWDVKSLESALKDLKI 371
>BC002988-1|AAH02988.2| 372|Homo sapiens actin related protein 2/3
complex, subunit 1B, 41kDa protein.
Length = 372
Score = 119 bits (287), Expect = 9e-27
Identities = 52/83 (62%), Positives = 65/83 (78%)
Frame = +1
Query: 7 EPIRSTVTSIDWHPNNILLVAGSADFKVRVFSAYIKDIEDQPGPNVWGSKLPLGQLLAEF 186
+PIRSTV S+DWHPNN+LL AGS DFK R+FSAYIK++E++P P WGSK+P G+L+ E
Sbjct: 139 KPIRSTVLSLDWHPNNVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFE- 197
Query: 187 PNSPSGGGWVHSVSFSADGNKVA 255
S S GWVH V FSA G++VA
Sbjct: 198 --SSSSCGWVHGVCFSASGSRVA 218
Score = 76.2 bits (179), Expect = 1e-13
Identities = 35/87 (40%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
Frame = +3
Query: 255 WVAHDSSINVTDATKGRAVIKLKTEYLPFLGCSWITNNSLIVAGHSCIPLLYCHD--GDD 428
WV+HDS++ + DA K AV L +E LP L ++IT+NSL+ AGH C P+L+ +D
Sbjct: 219 WVSHDSTVCLADADKKMAVATLASETLPLLALTFITDNSLVAAGHDCFPVLFTYDAAAGM 278
Query: 429 IKYVAKLDNTQRNESGGLSAMKKFQSL 509
+ + +LD +++ GL+A ++FQ+L
Sbjct: 279 LSFGGRLDVPKQSSQRGLTARERFQNL 305
Score = 46.4 bits (105), Expect = 1e-04
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Frame = +2
Query: 476 GTVCYEEVPVLDRHARIE---TSDTFLDSIHQNAISCIHIFKGT*SRTNKFSTSGLDGQL 646
G E LD+ A E + LDS+H+N++S I + G ++ ++F T+G+DG +
Sbjct: 295 GLTARERFQNLDKKASSEGGTAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGM 354
Query: 647 SYWDLGTLGGHFKGSRL 697
S WD+ +L K ++
Sbjct: 355 SIWDVKSLESALKDLKI 371
>BC002562-1|AAH02562.1| 372|Homo sapiens actin related protein 2/3
complex, subunit 1B, 41kDa protein.
Length = 372
Score = 119 bits (287), Expect = 9e-27
Identities = 52/83 (62%), Positives = 65/83 (78%)
Frame = +1
Query: 7 EPIRSTVTSIDWHPNNILLVAGSADFKVRVFSAYIKDIEDQPGPNVWGSKLPLGQLLAEF 186
+PIRSTV S+DWHPNN+LL AGS DFK R+FSAYIK++E++P P WGSK+P G+L+ E
Sbjct: 139 KPIRSTVLSLDWHPNNVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFE- 197
Query: 187 PNSPSGGGWVHSVSFSADGNKVA 255
S S GWVH V FSA G++VA
Sbjct: 198 --SSSSCGWVHGVCFSASGSRVA 218
Score = 76.2 bits (179), Expect = 1e-13
Identities = 35/87 (40%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
Frame = +3
Query: 255 WVAHDSSINVTDATKGRAVIKLKTEYLPFLGCSWITNNSLIVAGHSCIPLLYCHD--GDD 428
WV+HDS++ + DA K AV L +E LP L ++IT+NSL+ AGH C P+L+ +D
Sbjct: 219 WVSHDSTVCLADADKKMAVATLASETLPLLALTFITDNSLVAAGHDCFPVLFTYDAAAGM 278
Query: 429 IKYVAKLDNTQRNESGGLSAMKKFQSL 509
+ + +LD +++ GL+A ++FQ+L
Sbjct: 279 LSFGGRLDVPKQSSQRGLTARERFQNL 305
Score = 46.4 bits (105), Expect = 1e-04
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Frame = +2
Query: 476 GTVCYEEVPVLDRHARIE---TSDTFLDSIHQNAISCIHIFKGT*SRTNKFSTSGLDGQL 646
G E LD+ A E + LDS+H+N++S I + G ++ ++F T+G+DG +
Sbjct: 295 GLTARERFQNLDKKASSEGGTAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGM 354
Query: 647 SYWDLGTLGGHFKGSRL 697
S WD+ +L K ++
Sbjct: 355 SIWDVKSLESALKDLKI 371
>AF006084-1|AAB64189.1| 372|Homo sapiens p41-Arc protein.
Length = 372
Score = 119 bits (287), Expect = 9e-27
Identities = 52/83 (62%), Positives = 65/83 (78%)
Frame = +1
Query: 7 EPIRSTVTSIDWHPNNILLVAGSADFKVRVFSAYIKDIEDQPGPNVWGSKLPLGQLLAEF 186
+PIRSTV S+DWHPNN+LL AGS DFK R+FSAYIK++E++P P WGSK+P G+L+ E
Sbjct: 139 KPIRSTVLSLDWHPNNVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFE- 197
Query: 187 PNSPSGGGWVHSVSFSADGNKVA 255
S S GWVH V FSA G++VA
Sbjct: 198 --SSSSCGWVHGVCFSASGSRVA 218
Score = 76.2 bits (179), Expect = 1e-13
Identities = 35/87 (40%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
Frame = +3
Query: 255 WVAHDSSINVTDATKGRAVIKLKTEYLPFLGCSWITNNSLIVAGHSCIPLLYCHD--GDD 428
WV+HDS++ + DA K AV L +E LP L ++IT+NSL+ AGH C P+L+ +D
Sbjct: 219 WVSHDSTVCLADADKKMAVATLASETLPLLALTFITDNSLVAAGHDCFPVLFTYDAAAGM 278
Query: 429 IKYVAKLDNTQRNESGGLSAMKKFQSL 509
+ + +LD +++ GL+A ++FQ+L
Sbjct: 279 LSFGGRLDVPKQSSQRGLTARERFQNL 305
Score = 46.4 bits (105), Expect = 1e-04
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Frame = +2
Query: 476 GTVCYEEVPVLDRHARIE---TSDTFLDSIHQNAISCIHIFKGT*SRTNKFSTSGLDGQL 646
G E LD+ A E + LDS+H+N++S I + G ++ ++F T+G+DG +
Sbjct: 295 GLTARERFQNLDKKASSEGGTAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGM 354
Query: 647 SYWDLGTLGGHFKGSRL 697
S WD+ +L K ++
Sbjct: 355 SIWDVKSLESALKDLKI 371
>AC004834-1|AAS00381.1| 166|Homo sapiens unknown protein.
Length = 166
Score = 52.8 bits (121), Expect = 1e-06
Identities = 21/27 (77%), Positives = 24/27 (88%)
Frame = +1
Query: 7 EPIRSTVTSIDWHPNNILLVAGSADFK 87
+PIRSTV S+DWHPNN+LL AGS DFK
Sbjct: 139 KPIRSTVLSLDWHPNNVLLAAGSCDFK 165
>Y12781-1|CAA73319.1| 577|Homo sapiens transducin (beta) like 1
protein protein.
Length = 577
Score = 31.1 bits (67), Expect = 4.0
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 10 PIRSTVTSIDWHPNNILLVAGSADFKVRVFS 102
P VTS+DW+ N LL GS D R+++
Sbjct: 286 PSNKDVTSLDWNTNGTLLATGSYDGFARIWT 316
>BC052304-1|AAH52304.1| 577|Homo sapiens transducin (beta)-like
1X-linked protein.
Length = 577
Score = 31.1 bits (67), Expect = 4.0
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 10 PIRSTVTSIDWHPNNILLVAGSADFKVRVFS 102
P VTS+DW+ N LL GS D R+++
Sbjct: 286 PSNKDVTSLDWNTNGTLLATGSYDGFARIWT 316
>BC032708-1|AAH32708.1| 526|Homo sapiens TBL1X protein protein.
Length = 526
Score = 31.1 bits (67), Expect = 4.0
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 10 PIRSTVTSIDWHPNNILLVAGSADFKVRVFS 102
P VTS+DW+ N LL GS D R+++
Sbjct: 235 PSNKDVTSLDWNTNGTLLATGSYDGFARIWT 265
>AB209608-1|BAD92845.1| 540|Homo sapiens transducin beta-like 1X
variant protein.
Length = 540
Score = 31.1 bits (67), Expect = 4.0
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 10 PIRSTVTSIDWHPNNILLVAGSADFKVRVFS 102
P VTS+DW+ N LL GS D R+++
Sbjct: 249 PSNKDVTSLDWNTNGTLLATGSYDGFARIWT 279
>AF217525-1|AAF27525.1| 2012|Homo sapiens Down syndrome cell
adhesion molecule protein.
Length = 2012
Score = 30.7 bits (66), Expect = 5.3
Identities = 11/41 (26%), Positives = 23/41 (56%)
Frame = +1
Query: 13 IRSTVTSIDWHPNNILLVAGSADFKVRVFSAYIKDIEDQPG 135
+ + +T + W + + LV+GS + YIKD++++ G
Sbjct: 151 VEAYITVVSWEKDTVSLVSGSRFLITSTGALYIKDVQNEDG 191
>AF023450-1|AAC17967.1| 1571|Homo sapiens Down syndrome cell
adhesion molecule protein.
Length = 1571
Score = 30.7 bits (66), Expect = 5.3
Identities = 11/41 (26%), Positives = 23/41 (56%)
Frame = +1
Query: 13 IRSTVTSIDWHPNNILLVAGSADFKVRVFSAYIKDIEDQPG 135
+ + +T + W + + LV+GS + YIKD++++ G
Sbjct: 151 VEAYITVVSWEKDTVSLVSGSRFLITSTGALYIKDVQNEDG 191
>AF023449-1|AAC17966.1| 1896|Homo sapiens Down syndrome cell
adhesion molecule protein.
Length = 1896
Score = 30.7 bits (66), Expect = 5.3
Identities = 11/41 (26%), Positives = 23/41 (56%)
Frame = +1
Query: 13 IRSTVTSIDWHPNNILLVAGSADFKVRVFSAYIKDIEDQPG 135
+ + +T + W + + LV+GS + YIKD++++ G
Sbjct: 137 VEAYITVVSWEKDTVSLVSGSRFLITSTGALYIKDVQNEDG 177
>AB209136-1|BAD92373.1| 2023|Homo sapiens Down syndrome cell
adhesion molecule isoform CHD2-42 precursor variant
protein.
Length = 2023
Score = 30.7 bits (66), Expect = 5.3
Identities = 11/41 (26%), Positives = 23/41 (56%)
Frame = +1
Query: 13 IRSTVTSIDWHPNNILLVAGSADFKVRVFSAYIKDIEDQPG 135
+ + +T + W + + LV+GS + YIKD++++ G
Sbjct: 162 VEAYITVVSWEKDTVSLVSGSRFLITSTGALYIKDVQNEDG 202
>AF193594-1|AAP97280.1| 357|Homo sapiens MD6b protein.
Length = 357
Score = 29.9 bits (64), Expect = 9.3
Identities = 13/27 (48%), Positives = 21/27 (77%)
Frame = +1
Query: 22 TVTSIDWHPNNILLVAGSADFKVRVFS 102
TV S+D++ +LV+GSADF V+V++
Sbjct: 163 TVFSVDYNDELDILVSGSADFTVKVWA 189
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,493,937
Number of Sequences: 237096
Number of extensions: 2355562
Number of successful extensions: 10227
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 9808
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10207
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8175213644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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