Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0825
(705 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY058778-1|AAL14007.1| 377|Drosophila melanogaster SD06579p pro... 138 7e-33
AJ133649-1|CAB38634.1| 377|Drosophila melanogaster actin relate... 138 7e-33
AE014134-2408|AAN10852.1| 377|Drosophila melanogaster CG8978-PB... 138 7e-33
AE014134-2407|AAF53339.1| 377|Drosophila melanogaster CG8978-PA... 138 7e-33
AY118902-1|AAM50762.1| 665|Drosophila melanogaster LD11581p pro... 29 4.7
AE014298-2935|AAF49018.2| 665|Drosophila melanogaster CG12703-P... 29 4.7
>AY058778-1|AAL14007.1| 377|Drosophila melanogaster SD06579p
protein.
Length = 377
Score = 138 bits (334), Expect = 7e-33
Identities = 61/83 (73%), Positives = 74/83 (89%), Gaps = 1/83 (1%)
Frame = +1
Query: 7 EPIRSTVTSIDWHPNNILLVAGSADFKVRVFSAYIKDIEDQPGPNVWGSKLPLGQLLAEF 186
+PIRSTVTS+DWHPNN+LL+AGS D+KVRVFSA+IKDIE+ P P WG++ PLGQL+AEF
Sbjct: 143 KPIRSTVTSLDWHPNNVLLLAGSTDYKVRVFSAFIKDIEEPPTPTPWGNRKPLGQLMAEF 202
Query: 187 PNS-PSGGGWVHSVSFSADGNKV 252
NS SGGGW++SVSFS+DGNKV
Sbjct: 203 RNSQTSGGGWINSVSFSSDGNKV 225
Score = 103 bits (247), Expect = 2e-22
Identities = 43/87 (49%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
Frame = +3
Query: 252 CWVAHDSSINVTDATKGRAVIKLKTEYLPFLGCSWITNNSLIVAGHSCIPLLYCHDGD-D 428
CWV HDS +++ DAT G VI+ +T YLPFL C W++ S++VAG+SC+PLLY D
Sbjct: 226 CWVGHDSCVSIADATNGNTVIRCRTGYLPFLSCEWVSPTSVVVAGYSCVPLLYSLTADGK 285
Query: 429 IKYVAKLDNTQRNESGGLSAMKKFQSL 509
+ KLD +Q+ ES G++AM+ FQS+
Sbjct: 286 LVLSGKLDKSQKKESSGITAMRIFQSM 312
Score = 59.7 bits (138), Expect = 4e-09
Identities = 25/52 (48%), Positives = 37/52 (71%)
Frame = +2
Query: 506 LDRHARIETSDTFLDSIHQNAISCIHIFKGT*SRTNKFSTSGLDGQLSYWDL 661
+DR+ R E +DT +DSIHQNAI+ + ++ G + K STSG+DGQL W++
Sbjct: 312 MDRNMRTENTDTVVDSIHQNAITSVRLYAGDKASATKVSTSGVDGQLVIWNV 363
>AJ133649-1|CAB38634.1| 377|Drosophila melanogaster actin related
complex p41 subunit protein.
Length = 377
Score = 138 bits (334), Expect = 7e-33
Identities = 61/83 (73%), Positives = 74/83 (89%), Gaps = 1/83 (1%)
Frame = +1
Query: 7 EPIRSTVTSIDWHPNNILLVAGSADFKVRVFSAYIKDIEDQPGPNVWGSKLPLGQLLAEF 186
+PIRSTVTS+DWHPNN+LL+AGS D+KVRVFSA+IKDIE+ P P WG++ PLGQL+AEF
Sbjct: 143 KPIRSTVTSLDWHPNNVLLLAGSTDYKVRVFSAFIKDIEEPPTPTPWGNRKPLGQLMAEF 202
Query: 187 PNS-PSGGGWVHSVSFSADGNKV 252
NS SGGGW++SVSFS+DGNKV
Sbjct: 203 RNSQTSGGGWINSVSFSSDGNKV 225
Score = 103 bits (247), Expect = 2e-22
Identities = 43/87 (49%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
Frame = +3
Query: 252 CWVAHDSSINVTDATKGRAVIKLKTEYLPFLGCSWITNNSLIVAGHSCIPLLYCHDGD-D 428
CWV HDS +++ DAT G VI+ +T YLPFL C W++ S++VAG+SC+PLLY D
Sbjct: 226 CWVGHDSCVSIADATNGNTVIRCRTGYLPFLSCEWVSPTSVVVAGYSCVPLLYSLTADGK 285
Query: 429 IKYVAKLDNTQRNESGGLSAMKKFQSL 509
+ KLD +Q+ ES G++AM+ FQS+
Sbjct: 286 LVLSGKLDKSQKKESSGITAMRIFQSM 312
Score = 59.7 bits (138), Expect = 4e-09
Identities = 25/52 (48%), Positives = 37/52 (71%)
Frame = +2
Query: 506 LDRHARIETSDTFLDSIHQNAISCIHIFKGT*SRTNKFSTSGLDGQLSYWDL 661
+DR+ R E +DT +DSIHQNAI+ + ++ G + K STSG+DGQL W++
Sbjct: 312 MDRNMRTENTDTVVDSIHQNAITSVRLYAGDKASATKVSTSGVDGQLVIWNV 363
>AE014134-2408|AAN10852.1| 377|Drosophila melanogaster CG8978-PB,
isoform B protein.
Length = 377
Score = 138 bits (334), Expect = 7e-33
Identities = 61/83 (73%), Positives = 74/83 (89%), Gaps = 1/83 (1%)
Frame = +1
Query: 7 EPIRSTVTSIDWHPNNILLVAGSADFKVRVFSAYIKDIEDQPGPNVWGSKLPLGQLLAEF 186
+PIRSTVTS+DWHPNN+LL+AGS D+KVRVFSA+IKDIE+ P P WG++ PLGQL+AEF
Sbjct: 143 KPIRSTVTSLDWHPNNVLLLAGSTDYKVRVFSAFIKDIEEPPTPTPWGNRKPLGQLMAEF 202
Query: 187 PNS-PSGGGWVHSVSFSADGNKV 252
NS SGGGW++SVSFS+DGNKV
Sbjct: 203 RNSQTSGGGWINSVSFSSDGNKV 225
Score = 103 bits (247), Expect = 2e-22
Identities = 43/87 (49%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
Frame = +3
Query: 252 CWVAHDSSINVTDATKGRAVIKLKTEYLPFLGCSWITNNSLIVAGHSCIPLLYCHDGD-D 428
CWV HDS +++ DAT G VI+ +T YLPFL C W++ S++VAG+SC+PLLY D
Sbjct: 226 CWVGHDSCVSIADATNGNTVIRCRTGYLPFLSCEWVSPTSVVVAGYSCVPLLYSLTADGK 285
Query: 429 IKYVAKLDNTQRNESGGLSAMKKFQSL 509
+ KLD +Q+ ES G++AM+ FQS+
Sbjct: 286 LVLSGKLDKSQKKESSGITAMRIFQSM 312
Score = 59.7 bits (138), Expect = 4e-09
Identities = 25/52 (48%), Positives = 37/52 (71%)
Frame = +2
Query: 506 LDRHARIETSDTFLDSIHQNAISCIHIFKGT*SRTNKFSTSGLDGQLSYWDL 661
+DR+ R E +DT +DSIHQNAI+ + ++ G + K STSG+DGQL W++
Sbjct: 312 MDRNMRTENTDTVVDSIHQNAITSVRLYAGDKASATKVSTSGVDGQLVIWNV 363
>AE014134-2407|AAF53339.1| 377|Drosophila melanogaster CG8978-PA,
isoform A protein.
Length = 377
Score = 138 bits (334), Expect = 7e-33
Identities = 61/83 (73%), Positives = 74/83 (89%), Gaps = 1/83 (1%)
Frame = +1
Query: 7 EPIRSTVTSIDWHPNNILLVAGSADFKVRVFSAYIKDIEDQPGPNVWGSKLPLGQLLAEF 186
+PIRSTVTS+DWHPNN+LL+AGS D+KVRVFSA+IKDIE+ P P WG++ PLGQL+AEF
Sbjct: 143 KPIRSTVTSLDWHPNNVLLLAGSTDYKVRVFSAFIKDIEEPPTPTPWGNRKPLGQLMAEF 202
Query: 187 PNS-PSGGGWVHSVSFSADGNKV 252
NS SGGGW++SVSFS+DGNKV
Sbjct: 203 RNSQTSGGGWINSVSFSSDGNKV 225
Score = 103 bits (247), Expect = 2e-22
Identities = 43/87 (49%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
Frame = +3
Query: 252 CWVAHDSSINVTDATKGRAVIKLKTEYLPFLGCSWITNNSLIVAGHSCIPLLYCHDGD-D 428
CWV HDS +++ DAT G VI+ +T YLPFL C W++ S++VAG+SC+PLLY D
Sbjct: 226 CWVGHDSCVSIADATNGNTVIRCRTGYLPFLSCEWVSPTSVVVAGYSCVPLLYSLTADGK 285
Query: 429 IKYVAKLDNTQRNESGGLSAMKKFQSL 509
+ KLD +Q+ ES G++AM+ FQS+
Sbjct: 286 LVLSGKLDKSQKKESSGITAMRIFQSM 312
Score = 59.7 bits (138), Expect = 4e-09
Identities = 25/52 (48%), Positives = 37/52 (71%)
Frame = +2
Query: 506 LDRHARIETSDTFLDSIHQNAISCIHIFKGT*SRTNKFSTSGLDGQLSYWDL 661
+DR+ R E +DT +DSIHQNAI+ + ++ G + K STSG+DGQL W++
Sbjct: 312 MDRNMRTENTDTVVDSIHQNAITSVRLYAGDKASATKVSTSGVDGQLVIWNV 363
>AY118902-1|AAM50762.1| 665|Drosophila melanogaster LD11581p
protein.
Length = 665
Score = 29.5 bits (63), Expect = 4.7
Identities = 14/48 (29%), Positives = 28/48 (58%)
Frame = -3
Query: 382 ATIRELLVIQLHPKNGRYSVFSFMTALPLVASVTLIELSWATQQLYFR 239
AT+ E +I ++ + ++ ++TALP ++ VT + L W+ +L R
Sbjct: 111 ATVVESTIIHMNRTKFKTALLKYLTALPAISVVTNV-LKWSLGELKLR 157
>AE014298-2935|AAF49018.2| 665|Drosophila melanogaster CG12703-PA
protein.
Length = 665
Score = 29.5 bits (63), Expect = 4.7
Identities = 14/48 (29%), Positives = 28/48 (58%)
Frame = -3
Query: 382 ATIRELLVIQLHPKNGRYSVFSFMTALPLVASVTLIELSWATQQLYFR 239
AT+ E +I ++ + ++ ++TALP ++ VT + L W+ +L R
Sbjct: 111 ATVVESTIIHMNRTKFKTALLKYLTALPAISVVTNV-LKWSLGELKLR 157
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,639,043
Number of Sequences: 53049
Number of extensions: 691647
Number of successful extensions: 2287
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2279
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3108380451
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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