Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0824
         (696 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    27   0.11 
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    22   5.5  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   7.3  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   9.6  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   9.6  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 27.5 bits (58), Expect = 0.11
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +3

Query: 189 F*IFRVYYYVCTDFQCIFFVVTVCVY 266
           F IF V++ +CT +    F++ +CVY
Sbjct: 89  FIIFTVHFLLCTYYFYYAFIILLCVY 114


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +2

Query: 464 ERERESENTLYWQTNQFTLKKKIACVQ 544
           + E E  +T+YW T +F L K+   V+
Sbjct: 390 DAEIEKLSTVYWFTVEFGLCKESGVVK 416


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 10/39 (25%), Positives = 18/39 (46%)
 Frame = +2

Query: 461 EERERESENTLYWQTNQFTLKKKIACVQFTRVRSETFKK 577
           ++R R     +Y +  +FT +  +       V SET +K
Sbjct: 321 QDRLRHEVTEIYNENGEFTYENILGMKYLDMVISETLRK 359


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = -2

Query: 278 NNIIIHTHRNYEKNALKISTNIII 207
           NN+++H  +N     L I  +++I
Sbjct: 107 NNVLVHRSQNSNDVCLAIPESLVI 130


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +3

Query: 306 FVCKYLFCSR 335
           FVC +LFC +
Sbjct: 345 FVCNWLFCGK 354


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,429
Number of Sequences: 336
Number of extensions: 4408
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)