Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0824
(696 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 24 1.6
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 24 1.6
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 23 2.1
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 23 2.1
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 23 3.7
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 23 3.7
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 22 6.4
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 22 6.4
AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase ... 22 6.4
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 6.4
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 6.4
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 6.4
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 6.4
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 6.4
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 6.4
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 6.4
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 22 6.4
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 6.4
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 22 6.4
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 23.8 bits (49), Expect = 1.6
Identities = 12/49 (24%), Positives = 25/49 (51%)
Frame = -1
Query: 222 YKHNNTL*ISKKIVSSDQFRIYFMKNKQFIKYLTGNRRFLGTRTHLNQF 76
++H ++ ++ S D+ R Y K++Q+ K +FL RT ++
Sbjct: 224 FQHTSSRYSRERSCSRDRNREYRKKDRQYEKLHNEKEKFLEERTSRKRY 272
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 23.8 bits (49), Expect = 1.6
Identities = 12/49 (24%), Positives = 25/49 (51%)
Frame = -1
Query: 222 YKHNNTL*ISKKIVSSDQFRIYFMKNKQFIKYLTGNRRFLGTRTHLNQF 76
++H ++ ++ S D+ R Y K++Q+ K +FL RT ++
Sbjct: 224 FQHTSSRYSRERSCSRDRNREYRKKDRQYEKLHNEKEKFLEERTSRKRY 272
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 2.1
Identities = 10/42 (23%), Positives = 21/42 (50%)
Frame = -2
Query: 284 ALNNIIIHTHRNYEKNALKISTNIIIHSEYLKRLLAPTNLEY 159
+L+N IH + NY+ N + + Y++++ P + Y
Sbjct: 84 SLSNKTIHNNNNYKYNYNNNCKKLYYNINYIEQIPIPVPVYY 125
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 23.4 bits (48), Expect = 2.1
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = -1
Query: 222 YKHNNTL*ISKKIVSSDQFRIYFMKNKQFIKYLTGNRRFLGTRT 91
++H ++ ++ S D+ R Y K++Q+ K +FL RT
Sbjct: 224 FQHTSSRYSRERSCSRDRNREYRKKDRQYEKLHNEKEKFLEERT 267
Score = 22.6 bits (46), Expect = 3.7
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -2
Query: 284 ALNNIIIHTHRNYEKNALKISTNII 210
+L+N IH + NY+ K+ NII
Sbjct: 317 SLSNKTIHNNNNYKNYNKKLYYNII 341
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 22.6 bits (46), Expect = 3.7
Identities = 10/37 (27%), Positives = 17/37 (45%)
Frame = +2
Query: 422 GKNIITKKKPHLFEERERESENTLYWQTNQFTLKKKI 532
G + KKK +E + W+ + T+KKK+
Sbjct: 207 GPKVPEKKKEDEIDEGKESKTKLSQWRKDGGTVKKKV 243
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.7
Identities = 9/37 (24%), Positives = 18/37 (48%)
Frame = -2
Query: 284 ALNNIIIHTHRNYEKNALKISTNIIIHSEYLKRLLAP 174
+L+N IH + NY N + + Y++++ P
Sbjct: 84 SLSNKTIHNNNNYNNNNYNNYKKLYYNINYIEQVPVP 120
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 21.8 bits (44), Expect = 6.4
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +1
Query: 145 IFHKVYSKLVGANNLFRYSECIIMF 219
IF+ +K +G + F YSE ++ F
Sbjct: 578 IFYDKLNKAIGGSEPFTYSEKMLGF 602
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 21.8 bits (44), Expect = 6.4
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +1
Query: 145 IFHKVYSKLVGANNLFRYSECIIMF 219
IF+ +K +G + F YSE ++ F
Sbjct: 578 IFYDKLNKAIGGSEPFTYSEKMLGF 602
>AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase
protein.
Length = 510
Score = 21.8 bits (44), Expect = 6.4
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2
Query: 464 ERERESENTLYWQTNQFTLKKK 529
+ E E +T+YW T +F L K+
Sbjct: 368 DEEIEKLSTIYWFTVEFGLCKE 389
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 6.4
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = +2
Query: 470 ERESENTLYWQTNQFTLKKKIACVQFTRVRSETFKKLKY 586
ERE + +TN+ T + + V + +ET KY
Sbjct: 172 EREEIKNILNKTNEITEHRTVLAVNIEKSENETKTCKKY 210
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 6.4
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = +2
Query: 470 ERESENTLYWQTNQFTLKKKIACVQFTRVRSETFKKLKY 586
ERE + +TN+ T + + V + +ET KY
Sbjct: 172 EREEIKNILNKTNEITEHRTVLAVNIEKSENETKTCKKY 210
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 6.4
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = +2
Query: 470 ERESENTLYWQTNQFTLKKKIACVQFTRVRSETFKKLKY 586
ERE + +TN+ T + + V + +ET KY
Sbjct: 172 EREEIKNILNKTNEITEHRTVLAVNIEKSENETKTCKKY 210
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 6.4
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = +2
Query: 470 ERESENTLYWQTNQFTLKKKIACVQFTRVRSETFKKLKY 586
ERE + +TN+ T + + V + +ET KY
Sbjct: 172 EREEIKNILNKTNEITEHRTVLAVNIEKSENETKTCKKY 210
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 6.4
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = +2
Query: 470 ERESENTLYWQTNQFTLKKKIACVQFTRVRSETFKKLKY 586
ERE + +TN+ T + + V + +ET KY
Sbjct: 172 EREEIKNILNKTNEITEHRTVLAVNIEKSENETKTCKKY 210
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 6.4
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = +2
Query: 470 ERESENTLYWQTNQFTLKKKIACVQFTRVRSETFKKLKY 586
ERE + +TN+ T + + V + +ET KY
Sbjct: 172 EREEIKNILNKTNEITEHRTVLAVNIEKSENETKTCKKY 210
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.8 bits (44), Expect = 6.4
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = +2
Query: 470 ERESENTLYWQTNQFTLKKKIACVQFTRVRSETFKKLKY 586
ERE + +TN+ T + + V + +ET KY
Sbjct: 172 EREEIKNILNKTNEITEHRTVLAVNIEKSENETKTCKKY 210
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 21.8 bits (44), Expect = 6.4
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -1
Query: 150 KNKQFIKYLTGN 115
KN QF++Y GN
Sbjct: 107 KNTQFLRYFVGN 118
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.8 bits (44), Expect = 6.4
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = +2
Query: 470 ERESENTLYWQTNQFTLKKKIACVQFTRVRSETFKKLKY 586
ERE + +TN+ T + + V + +ET KY
Sbjct: 172 EREEIKNILNKTNEITEHRTVLAVNIEKSENETKTCKKY 210
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 21.8 bits (44), Expect = 6.4
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -1
Query: 150 KNKQFIKYLTGN 115
KN QF++Y GN
Sbjct: 107 KNTQFLRYFVGN 118
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,747
Number of Sequences: 438
Number of extensions: 4952
Number of successful extensions: 22
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21317625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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