Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0823
         (606 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q2QKR8 Cluster: Maturase; n=2; Acorus|Rep: Maturase - A...    34   2.3  
UniRef50_UPI0000ECD1A5 Cluster: PREDICTED: Gallus gallus hypothe...    32   9.2  
UniRef50_A5X6X5 Cluster: Titin a; n=10; Euteleostomi|Rep: Titin ...    32   9.2  
UniRef50_Q9G859 Cluster: Haem lyase; n=1; Malawimonas jakobiform...    32   9.2  

>UniRef50_Q2QKR8 Cluster: Maturase; n=2; Acorus|Rep: Maturase -
           Acorus gramineus (Dwarf sweet flag)
          Length = 490

 Score = 34.3 bits (75), Expect = 2.3
 Identities = 16/31 (51%), Positives = 21/31 (67%)
 Frame = -3

Query: 457 IVTIYKRITIFLQDRITLLRYTINKTTVCFR 365
           I+ I KR+T FLQ R+ LL Y +N TT+  R
Sbjct: 202 IIEIEKRLTYFLQSRLNLLEYNVN-TTIAAR 231


>UniRef50_UPI0000ECD1A5 Cluster: PREDICTED: Gallus gallus
           hypothetical LOC417921 (LOC417921), mRNA.; n=2; Gallus
           gallus|Rep: PREDICTED: Gallus gallus hypothetical
           LOC417921 (LOC417921), mRNA. - Gallus gallus
          Length = 1212

 Score = 32.3 bits (70), Expect = 9.2
 Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
 Frame = -2

Query: 260 YLDSSVKVTDMTLIRILQNILDFF*QTKVIIECNL----KIIQIYPRFVWCF-VTSNG*P 96
           Y DSS  +   T +++L++I ++     V+  CN     K+I     F+ C   T N  P
Sbjct: 591 YFDSSKSLLSFTNLQVLEDIFNWSLSLTVVPLCNQQIINKLILAKMHFIICLSATINNVP 650

Query: 95  FENIKCHYS--NLPWNWVESKFRIIRSRIQ 12
            +  KC YS  N+P     S  +  R R Q
Sbjct: 651 EKVEKCIYSVDNMPDGNTPSNVKNFRQREQ 680


>UniRef50_A5X6X5 Cluster: Titin a; n=10; Euteleostomi|Rep: Titin a -
            Danio rerio (Zebrafish) (Brachydanio rerio)
          Length = 32757

 Score = 32.3 bits (70), Expect = 9.2
 Identities = 19/46 (41%), Positives = 24/46 (52%)
 Frame = -2

Query: 344  KFTFRHLKHSEIVL*SQRRFPKRFQYFRYLDSSVKVTDMTLIRILQ 207
            K TF   K  EIVL ++ R  KRFQ   + DS  K  D+ +I   Q
Sbjct: 9009 KETFTDPKTKEIVLQNEERLQKRFQSKPFADSPQKNEDIAVIEFSQ 9054


>UniRef50_Q9G859 Cluster: Haem lyase; n=1; Malawimonas
           jakobiformis|Rep: Haem lyase - Malawimonas jakobiformis
          Length = 616

 Score = 32.3 bits (70), Expect = 9.2
 Identities = 19/42 (45%), Positives = 26/42 (61%)
 Frame = +1

Query: 130 NLGYICIIFKLHSIITLVC*KKSKIFCKIRINVISVTLTLLS 255
           NLG+  +IF L   I L+  KKS I  KI INV S+ + L++
Sbjct: 4   NLGHYSLIFLLIFAIFLLFIKKSIISKKILINVFSIKIILIT 45


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 513,392,652
Number of Sequences: 1657284
Number of extensions: 9284060
Number of successful extensions: 14664
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14664
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43147568152
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)