Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0823
         (606 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    22   3.5  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    22   3.5  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   4.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   4.6  
AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A prot...    21   6.1  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    21   6.1  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   8.1  

>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = -2

Query: 137 PRFVWCFVTSNG*PFENIKCHYSNLP 60
           PR+ W  +T    PF+ + C  +  P
Sbjct: 131 PRYPWMSITDWMSPFDRVVCGPNGCP 156


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = -2

Query: 137 PRFVWCFVTSNG*PFENIKCHYSNLP 60
           PR+ W  +T    PF+ + C  +  P
Sbjct: 190 PRYPWMSITDWMSPFDRVVCGPNGCP 215


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 7/27 (25%), Positives = 16/27 (59%)
 Frame = -3

Query: 88  ILNVTIQTSHGIGLNRNSVLFEVGYKL 8
           IL++ +   H + +N N  +  +GY++
Sbjct: 861 ILDLLMDYEHTVKINENISMLYIGYQI 887


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 7/27 (25%), Positives = 16/27 (59%)
 Frame = -3

Query: 88  ILNVTIQTSHGIGLNRNSVLFEVGYKL 8
           IL++ +   H + +N N  +  +GY++
Sbjct: 861 ILDLLMDYEHTVKINENISMLYIGYQI 887


>AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A
           protein.
          Length = 150

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -2

Query: 137 PRFVWCFVTSNG*PFENIKC 78
           PR+ W  +T    PF+ + C
Sbjct: 131 PRYPWMSITDWMSPFDRVVC 150


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -2

Query: 137 PRFVWCFVTSNG*PFENIKC 78
           PR+ W  +T    PF+ + C
Sbjct: 190 PRYPWMSITDWMSPFDRVVC 209


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -1

Query: 408 HY*DTQLTKLQSVLEFTIYKNKIYVQ 331
           +Y  T++  L+SVLE  I   +IY Q
Sbjct: 114 NYAFTRIILLKSVLEIVIIDIEIYSQ 139


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,626
Number of Sequences: 336
Number of extensions: 2987
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15352827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)