Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0820
         (600 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    29   0.023
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    24   1.1  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   3.4  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    21   6.0  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 29.5 bits (63), Expect = 0.023
 Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
 Frame = -1

Query: 270 AFSLLAVDLLVPVEVYYAQISNYEILCYYHDDLLAVEVAVVHQILFDCRSYSWLAFAFYA 91
           AF +  V LL  + +YY  +  + +LC Y+    A  +  VH +   C  + + AF  + 
Sbjct: 119 AFIIFTVHLLFLLCIYYFVVPLFFLLCIYY-FYCAFIIFTVHLLFLLCIYHFFCAFIIFT 177

Query: 90  QG-LSCFDIVIFTL 52
              L C   + F +
Sbjct: 178 MHLLFCCAFIFFNM 191


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -3

Query: 103 CILRTRTFLF*YCYFYVN 50
           C+++  T +F +CY Y N
Sbjct: 261 CLIQFNTIVFSFCYCYYN 278



 Score = 23.8 bits (49), Expect = 1.1
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -3

Query: 103 CILRTRTFLF*YCYFYVNIYSXSTNP 26
           C+++  T +F +CY Y   YS S  P
Sbjct: 542 CLIQFNTIVFAFCYCY---YSISIRP 564


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = -1

Query: 213 ISNYEILCYYHDDLLAVEVAVVHQILFDCRSYSWLAF 103
           +S YEI  + H+D   +      Q+ F  R   W+ F
Sbjct: 797 MSFYEICDFLHEDNTTLVWDNEQQVPFAYRGNQWVGF 833


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 237 PVEVYYAQISNYEILCYYHD 178
           P+E   AQ++N E+   +HD
Sbjct: 15  PIEKTKAQLANKELWDQFHD 34


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,536
Number of Sequences: 336
Number of extensions: 1429
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15143945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)