SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0818
         (666 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D56D83 Cluster: PREDICTED: similar to CG3238-PA;...    96   8e-19
UniRef50_UPI00015B5E6A Cluster: PREDICTED: similar to GA16856-PA...    93   4e-18
UniRef50_Q9VQR3 Cluster: CG3238-PA; n=3; Diptera|Rep: CG3238-PA ...    89   1e-16
UniRef50_A7RTT7 Cluster: Predicted protein; n=1; Nematostella ve...    58   3e-07
UniRef50_Q4SSJ3 Cluster: Chromosome 15 SCAF14367, whole genome s...    46   6e-04
UniRef50_UPI000065FA79 Cluster: Uncharacterized protein C15orf20...    44   0.003
UniRef50_Q9H611 Cluster: ATP-dependent DNA helicase PIF1; n=28; ...    36   1.2  
UniRef50_Q54C21 Cluster: Putative uncharacterized protein; n=1; ...    35   2.0  
UniRef50_Q55FJ4 Cluster: Putative uncharacterized protein; n=1; ...    33   4.7  
UniRef50_Q97GG4 Cluster: Predicted membrane protein; n=1; Clostr...    33   8.2  
UniRef50_Q4FL17 Cluster: Pyridoxal-phosphate dependent enzyme; n...    33   8.2  
UniRef50_A5W832 Cluster: Putative uncharacterized protein; n=2; ...    33   8.2  

>UniRef50_UPI0000D56D83 Cluster: PREDICTED: similar to CG3238-PA;
           n=2; Endopterygota|Rep: PREDICTED: similar to CG3238-PA
           - Tribolium castaneum
          Length = 634

 Score = 95.9 bits (228), Expect = 8e-19
 Identities = 45/77 (58%), Positives = 57/77 (74%)
 Frame = +2

Query: 26  ESFLSCAVTVEWTTTQGSISRKIHYKTGSLRLIRNEFREMFLEVTSEKHAATKLALKSFN 205
           ES LSC+V +EW+  QG I RK+ +K+  LRLIRN+ RE+F+EVT+ K    KL LK  +
Sbjct: 4   ESVLSCSVNIEWSNPQGIIQRKLAHKSAFLRLIRNDAREIFIEVTAGKSVPVKLQLKGIS 63

Query: 206 VFKKFMAEGKASIKFQE 256
           V  KFM+EGKASIKFQE
Sbjct: 64  VHNKFMSEGKASIKFQE 80



 Score = 62.9 bits (146), Expect = 7e-09
 Identities = 31/65 (47%), Positives = 43/65 (66%)
 Frame = +1

Query: 259 NCTIFISNAPPTNLVMFLRTIFVKMTSDEEQKANKTPSKQSMXXKLLSGKSQSFDEISPV 438
           +C +F+SNAPP  L  FL+T+FVKMT  +        S QS+  +LLS K  +F+EISPV
Sbjct: 82  HCMMFLSNAPPNQLFTFLKTVFVKMTGGKPAPT----SHQSLRTQLLSNKPATFEEISPV 137

Query: 439 TVADI 453
           T A++
Sbjct: 138 TTAEM 142



 Score = 49.6 bits (113), Expect = 7e-05
 Identities = 25/51 (49%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
 Frame = +3

Query: 510 KKRKNDDPSRGPAP-KKLYSPSPLTTTNSLNSEQQRVLEACLGGKNIFFTG 659
           K++ +  P   PA  K+LY+ SP T    L+ EQ+ VLEACL G+N+FFTG
Sbjct: 163 KRKLSPRPGAKPASSKRLYAASP-TPNEPLDIEQKEVLEACLSGRNVFFTG 212


>UniRef50_UPI00015B5E6A Cluster: PREDICTED: similar to GA16856-PA;
           n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
           GA16856-PA - Nasonia vitripennis
          Length = 507

 Score = 93.5 bits (222), Expect = 4e-18
 Identities = 44/81 (54%), Positives = 57/81 (70%), Gaps = 1/81 (1%)
 Frame = +2

Query: 14  MEAGESFLSCAVTVEWTTTQGSISRKIHYKTGSLRLIRNEFREMFLEVTSEK-HAATKLA 190
           ME    F++CA  +EWT  QGS +RK++Y+T + RLIRN FR + +EV +EK   A KL 
Sbjct: 1   MEGESCFVTCATVIEWTNAQGSSTRKVNYRTATSRLIRNSFRHLLVEVRAEKASGAIKLH 60

Query: 191 LKSFNVFKKFMAEGKASIKFQ 253
           LK F VF +FM EGKASIKF+
Sbjct: 61  LKEFAVFNRFMNEGKASIKFK 81



 Score = 54.0 bits (124), Expect = 3e-06
 Identities = 28/66 (42%), Positives = 44/66 (66%)
 Frame = +1

Query: 259 NCTIFISNAPPTNLVMFLRTIFVKMTSDEEQKANKTPSKQSMXXKLLSGKSQSFDEISPV 438
           NCT++ SNAP   L  FL+TIFVKM S+++  ++K P K  +  K+L   +Q   ++SP 
Sbjct: 84  NCTLYFSNAPVAQLTNFLKTIFVKM-SNKDDDSHK-PVKNPLREKVLG--NQGVQDVSPA 139

Query: 439 TVADIH 456
           TVA+++
Sbjct: 140 TVAELN 145


>UniRef50_Q9VQR3 Cluster: CG3238-PA; n=3; Diptera|Rep: CG3238-PA -
           Drosophila melanogaster (Fruit fly)
          Length = 663

 Score = 88.6 bits (210), Expect = 1e-16
 Identities = 40/80 (50%), Positives = 54/80 (67%)
 Frame = +2

Query: 14  MEAGESFLSCAVTVEWTTTQGSISRKIHYKTGSLRLIRNEFREMFLEVTSEKHAATKLAL 193
           M+  ++ L+CAV +EWT   G   RK+ YKT +LRL+RN+ RE+F+EVT EK    K  L
Sbjct: 1   MDLNDAVLTCAVNMEWTNAVGITGRKLAYKTATLRLVRNDLRELFVEVTPEKLKPLKFKL 60

Query: 194 KSFNVFKKFMAEGKASIKFQ 253
           K   V KKFM+EGKA+  F+
Sbjct: 61  KDLMVHKKFMSEGKATFNFK 80



 Score = 64.5 bits (150), Expect = 2e-09
 Identities = 29/65 (44%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
 Frame = +1

Query: 262 CTIFISNAPPTNLVMFLRTIFVKMTSDE-EQKANKTPSKQSMXXKLLSGKSQSFDEISPV 438
           CT+++SNAPP  L+ FLRTIFVKM  +E   + +    ++ +   L+SGK  SF+++SPV
Sbjct: 84  CTLYLSNAPPGTLMFFLRTIFVKMNGNEGGSQPDDATLQKKLREHLMSGKPSSFNDVSPV 143

Query: 439 TVADI 453
           T A++
Sbjct: 144 TTAEM 148



 Score = 41.1 bits (92), Expect = 0.023
 Identities = 22/47 (46%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
 Frame = +3

Query: 525 DDPSRG--PAPKKLYSPSPLTTTNSLNSEQQRVLEACLGGKNIFFTG 659
           ++  RG  PA KKLY+ S    +  L+ EQ  VL AC  GK++FFTG
Sbjct: 181 EEKERGTMPAAKKLYA-STTDESLRLSEEQMEVLRACTSGKSVFFTG 226


>UniRef50_A7RTT7 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 229

 Score = 57.6 bits (133), Expect = 3e-07
 Identities = 32/88 (36%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
 Frame = +2

Query: 14  MEAGESFLSCAVTVEWTTTQGSISRKIHYKTGSLRLIRNEFREMFLEVTSEKHAATK-LA 190
           ME GE  L C VTVE    +G ++R+  YK  ++ + R+EFR++ L + ++     K   
Sbjct: 1   MEVGE--LDCTVTVESLNARGIVTRRRTYKNVTVLVGRDEFRDIILRIIAKTSPLGKNYR 58

Query: 191 LKSFNVFKKFMAEGKASIKFQELIVQYL 274
           L+   + K+F++EGKA+IK   L +Q L
Sbjct: 59  LREITIHKRFVSEGKATIKLTTLGIQLL 86


>UniRef50_Q4SSJ3 Cluster: Chromosome 15 SCAF14367, whole genome
           shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
           Chromosome 15 SCAF14367, whole genome shotgun sequence -
           Tetraodon nigroviridis (Green puffer)
          Length = 514

 Score = 46.4 bits (105), Expect = 6e-04
 Identities = 27/80 (33%), Positives = 42/80 (52%)
 Frame = +2

Query: 35  LSCAVTVEWTTTQGSISRKIHYKTGSLRLIRNEFREMFLEVTSEKHAATKLALKSFNVFK 214
           L C V +E     G  +R+   +  S+ L RNEF+E+ L +   K   + L LK F +F 
Sbjct: 10  LRCCVALEQLDASGQAARRQLIRRASVILGRNEFQEIVLRIHDGKVQQSYL-LKDFKLFT 68

Query: 215 KFMAEGKASIKFQELIVQYL 274
           KF  +GK+++K     +Q L
Sbjct: 69  KFAKDGKSTVKLVPENIQVL 88



 Score = 37.5 bits (83), Expect = 0.29
 Identities = 24/65 (36%), Positives = 35/65 (53%)
 Frame = +1

Query: 259 NCTIFISNAPPTNLVMFLRTIFVKMTSDEEQKANKTPSKQSMXXKLLSGKSQSFDEISPV 438
           N  + ISN PP  L +FLRT+ VK    +  +A K  S +    KL +   +SF+ ISP+
Sbjct: 84  NIQVLISNCPPDQLSLFLRTLSVK---HQAWQAGKPLSDRE---KLKAALPRSFEAISPL 137

Query: 439 TVADI 453
              D+
Sbjct: 138 QQKDV 142


>UniRef50_UPI000065FA79 Cluster: Uncharacterized protein C15orf20.;
           n=2; Deuterostomia|Rep: Uncharacterized protein
           C15orf20. - Takifugu rubripes
          Length = 539

 Score = 44.0 bits (99), Expect = 0.003
 Identities = 26/80 (32%), Positives = 39/80 (48%)
 Frame = +2

Query: 35  LSCAVTVEWTTTQGSISRKIHYKTGSLRLIRNEFREMFLEVTSEKHAATKLALKSFNVFK 214
           L C VT+E     G  +R+   +  S+ L RNE +E+ L V   K       L+ F +F 
Sbjct: 5   LQCCVTLEQLNASGQATRRQLIRKASVILGRNESQEIILRVHDGK-VPQSYRLQEFKLFT 63

Query: 215 KFMAEGKASIKFQELIVQYL 274
           KF  +GK ++K     +Q L
Sbjct: 64  KFAKDGKCTVKLVPENIQVL 83


>UniRef50_Q9H611 Cluster: ATP-dependent DNA helicase PIF1; n=28;
           Euteleostomi|Rep: ATP-dependent DNA helicase PIF1 - Homo
           sapiens (Human)
          Length = 641

 Score = 35.5 bits (78), Expect = 1.2
 Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
 Frame = +2

Query: 17  EAGESFLSCAVTVEWTTTQGSISRKIHYKTGSLRLIRNEFREMFLEVTSEKHAATK--LA 190
           E  +S L C V VE  +  G   R+   +T  L L RNE RE+ L + +   A       
Sbjct: 11  EYEDSELRCRVAVEELSPGGQPRRRQALRTAELSLGRNERRELMLRLQAPGPAGRPRCFP 70

Query: 191 LKSFNVFKKFMAEGKASIK 247
           L++  +F +F   G+++++
Sbjct: 71  LRAARLFTRFAEAGRSTLR 89


>UniRef50_Q54C21 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 846

 Score = 34.7 bits (76), Expect = 2.0
 Identities = 15/23 (65%), Positives = 17/23 (73%)
 Frame = +3

Query: 591 SLNSEQQRVLEACLGGKNIFFTG 659
           SLN EQ  +L+  L GKNIFFTG
Sbjct: 180 SLNKEQLEILDNVLNGKNIFFTG 202


>UniRef50_Q55FJ4 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 933

 Score = 33.5 bits (73), Expect = 4.7
 Identities = 14/30 (46%), Positives = 21/30 (70%)
 Frame = +3

Query: 570 SPLTTTNSLNSEQQRVLEACLGGKNIFFTG 659
           S +  + +L+ EQ+ VL   +GG+NIFFTG
Sbjct: 502 SQIKVSENLSQEQRDVLNLVVGGENIFFTG 531


>UniRef50_Q97GG4 Cluster: Predicted membrane protein; n=1;
           Clostridium acetobutylicum|Rep: Predicted membrane
           protein - Clostridium acetobutylicum
          Length = 1484

 Score = 32.7 bits (71), Expect = 8.2
 Identities = 19/42 (45%), Positives = 22/42 (52%)
 Frame = +3

Query: 477 KIYNHNTITALKKRKNDDPSRGPAPKKLYSPSPLTTTNSLNS 602
           KIY  N ITAL   KN  P     PKK+Y+P   +   S NS
Sbjct: 607 KIYE-NKITALYDVKNSLPYLSNVPKKIYTPYGFSKLESYNS 647


>UniRef50_Q4FL17 Cluster: Pyridoxal-phosphate dependent enzyme; n=2;
           Candidatus Pelagibacter ubique|Rep: Pyridoxal-phosphate
           dependent enzyme - Pelagibacter ubique
          Length = 380

 Score = 32.7 bits (71), Expect = 8.2
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = +3

Query: 453 SYCEK*NFKIYNHNTITALKKRKNDDPSRGPAPKKLYSPSPLTTTNSLNSE 605
           S+ E  N+K    N  T L ++  D+  +  +    Y+P+PL   N LN E
Sbjct: 14  SFLENKNYKFNKENIFTQLPEKFIDEAIKAISSWDNYAPTPLVKLNKLNDE 64


>UniRef50_A5W832 Cluster: Putative uncharacterized protein; n=2;
           Pseudomonas putida|Rep: Putative uncharacterized protein
           - Pseudomonas putida F1
          Length = 46

 Score = 32.7 bits (71), Expect = 8.2
 Identities = 15/38 (39%), Positives = 24/38 (63%)
 Frame = +2

Query: 101 KTGSLRLIRNEFREMFLEVTSEKHAATKLALKSFNVFK 214
           KT  L + +  F E+ LE+TSE+HA   LA+++   F+
Sbjct: 5   KTQELPITKQFFAELILEMTSERHAGYTLAVQTRQFFE 42


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 649,521,974
Number of Sequences: 1657284
Number of extensions: 12363800
Number of successful extensions: 32089
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 30773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32045
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50826451017
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -