Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0818
         (666 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         25   2.1  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         25   2.1  
AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative 5-oxoprol...    23   8.7  
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol...    23   8.7  

>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +3

Query: 543 PAPKKLYSPSPLTTTNSLNSEQQRVLEA 626
           P PK +  P+P + TN  +S Q+R +E+
Sbjct: 417 PTPKPIPKPAPSSETNG-SSSQERGMES 443


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +3

Query: 543 PAPKKLYSPSPLTTTNSLNSEQQRVLEA 626
           P PK +  P+P + TN  +S Q+R +E+
Sbjct: 417 PTPKPIPKPAPSSETNG-SSSQERGMES 443


>AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 756

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +3

Query: 498 ITALKKRKNDDPSRGPAP 551
           +T ++   +DDP+ GP P
Sbjct: 304 VTGMRDAGDDDPAAGPPP 321


>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 1344

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +3

Query: 498 ITALKKRKNDDPSRGPAP 551
           +T ++   +DDP+ GP P
Sbjct: 304 VTGMRDAGDDDPAAGPPP 321


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 685,078
Number of Sequences: 2352
Number of extensions: 12508
Number of successful extensions: 44
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66486645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)