Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0817
         (591 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4YQ84 Cluster: Putative uncharacterized protein; n=1; ...    35   1.2  
UniRef50_Q6BW46 Cluster: Similar to CA6087|CaYHV1 Candida albica...    33   5.0  
UniRef50_Q6MTR5 Cluster: Putative uncharacterized protein; n=1; ...    33   6.6  
UniRef50_Q5CEY1 Cluster: Putative uncharacterized protein; n=3; ...    33   6.6  
UniRef50_UPI00015B5753 Cluster: PREDICTED: similar to LD11871p; ...    32   8.7  

>UniRef50_Q4YQ84 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium berghei|Rep: Putative uncharacterized protein
            - Plasmodium berghei
          Length = 897

 Score = 35.1 bits (77), Expect = 1.2
 Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 3/170 (1%)
 Frame = +3

Query: 18   NASFIRVFTIRGLKNVIQYLYSRLKIS-LSADFIGIAVHKH**KGFQYVGIQPNILCKRV 194
            N + I  F +      I+Y+Y ++  + +S   + I  + +  K F Y       LCKR+
Sbjct: 591  NCNLINNFVLGYNTGKIEYIYGKIVYNNISHCDLLIDYYSNKNKKFSYE------LCKRI 644

Query: 195  ALNGLIKK*NTTMPSV--CLFCT*ERIPIISYMYVNYRSIFTVSVLSSYLRKIYHANKEL 368
             LNG + K     P+V  CL  T + + I ++ Y +   I  V   S ++  ++  N   
Sbjct: 645  YLNGSVIKIGFA-PNVFFCLILTSKTLYICNFFYFSIYEIPNVCYNSRFVNFLWINNNSY 703

Query: 369  LLYNEIGLSFHRYLTNYPCLNYMGISEQSDFNVV*KSTYQINIGHFHVYS 518
             ++N+ G   + Y  N         S    F  + ++ Y  +I  +H+YS
Sbjct: 704  CIFNDNGY-IYLYEKNSKSDGLNSFSLVKCF-FIDQNIYYNSICEYHLYS 751


>UniRef50_Q6BW46 Cluster: Similar to CA6087|CaYHV1 Candida albicans
           CaYHV1 of unknown function; n=1; Debaryomyces
           hansenii|Rep: Similar to CA6087|CaYHV1 Candida albicans
           CaYHV1 of unknown function - Debaryomyces hansenii
           (Yeast) (Torulaspora hansenii)
          Length = 617

 Score = 33.1 bits (72), Expect = 5.0
 Identities = 22/65 (33%), Positives = 31/65 (47%)
 Frame = +3

Query: 303 SIFTVSVLSSYLRKIYHANKELLLYNEIGLSFHRYLTNYPCLNYMGISEQSDFNVV*KST 482
           S+FT S LSSY +  Y    ++  YNE   SF   L  +  L+Y  +      N + KS 
Sbjct: 217 SLFTPSDLSSYRKSNYRKGDKVGFYNETRKSFPN-LNTFLLLDYKRVMTTVIANDLVKSQ 275

Query: 483 YQINI 497
           Y  N+
Sbjct: 276 YTYNV 280


>UniRef50_Q6MTR5 Cluster: Putative uncharacterized protein; n=1;
           Mycoplasma mycoides subsp. mycoides SC|Rep: Putative
           uncharacterized protein - Mycoplasma mycoides subsp.
           mycoides SC
          Length = 285

 Score = 32.7 bits (71), Expect = 6.6
 Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
 Frame = -3

Query: 352 WYIFRKYDESTETVNIER*F-TYIYEIIGIRS*VQNKQTLGIVVFYFFINPFNATRLQRI 176
           WYI  + D + E +     F TY+Y  I I   ++  Q L I +F F    + A R+Q+I
Sbjct: 192 WYIKNQLDLANEFIKFIIIFQTYLYYAILIFELLEFDQLLNIGIFDFANKVYVAKRMQQI 251

Query: 175 FGWIPTYW 152
             W   +W
Sbjct: 252 -DWDKNFW 258


>UniRef50_Q5CEY1 Cluster: Putative uncharacterized protein; n=3;
           Cryptosporidium|Rep: Putative uncharacterized protein -
           Cryptosporidium hominis
          Length = 634

 Score = 32.7 bits (71), Expect = 6.6
 Identities = 16/43 (37%), Positives = 26/43 (60%)
 Frame = +3

Query: 267 IPIISYMYVNYRSIFTVSVLSSYLRKIYHANKELLLYNEIGLS 395
           IPII+Y+  + + I   +  + Y  ++ H N+ L L NE+GLS
Sbjct: 220 IPIINYLEFDQQFITLFNAHNIYNDQMIHLNRYLFLSNELGLS 262


>UniRef50_UPI00015B5753 Cluster: PREDICTED: similar to LD11871p;
           n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
           LD11871p - Nasonia vitripennis
          Length = 602

 Score = 32.3 bits (70), Expect = 8.7
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = -1

Query: 171 VGYLHIGILFINVYVPLYR*NPRIKKSLAANIG 73
           VG L I ++F++VY+   R  PRIKK    N G
Sbjct: 500 VGMLTIVVIFLSVYISKLRRRPRIKKRFLVNKG 532


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 567,652,232
Number of Sequences: 1657284
Number of extensions: 11464894
Number of successful extensions: 23240
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 22577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23233
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41073165837
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)