Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0817
         (591 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   1.9  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    23   1.9  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   5.9  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   5.9  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   5.9  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   7.8  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   7.8  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 11/44 (25%), Positives = 22/44 (50%)
 Frame = +3

Query: 333  YLRKIYHANKELLLYNEIGLSFHRYLTNYPCLNYMGISEQSDFN 464
            YL K Y  +K   L ++I  + H  +      +   ++E+++FN
Sbjct: 1031 YLVKFYKVSKSGELIHKIETNEHEIIDKIEMFSLQILNERAEFN 1074


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 11/44 (25%), Positives = 22/44 (50%)
 Frame = +3

Query: 333 YLRKIYHANKELLLYNEIGLSFHRYLTNYPCLNYMGISEQSDFN 464
           YL K Y  +K   L ++I  + H  +      +   ++E+++FN
Sbjct: 312 YLVKFYKVSKSGELIHKIETNEHEIIDKIEMFSLQILNERAEFN 355


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 5/22 (22%), Positives = 13/22 (59%)
 Frame = +2

Query: 272 YNFIYVCKLPFYIHGFCTLVIF 337
           YN +Y C++  Y++     +++
Sbjct: 330 YNILYFCRIMVYLNSAINPILY 351


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +1

Query: 307 YSRFLYSRHIYGKYTTRIKSFY 372
           YS F Y  +IY  Y+ ++   +
Sbjct: 85  YSYFFYLSYIYTTYSRKLSGIF 106


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +1

Query: 307 YSRFLYSRHIYGKYTTRIKSFY 372
           YS F Y  +IY  Y+ ++   +
Sbjct: 41  YSYFFYLSYIYTTYSRKLSGIF 62


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = -2

Query: 521 KGIYMKMTNINLVGGFLNYIKIRLFRYTHIIKTRVISK 408
           + IY  + N+N   GFL+  K  +F+    +    ISK
Sbjct: 214 EAIYASLKNLNTDHGFLDGQKPFIFQEVIDLGGEAISK 251


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 11/45 (24%), Positives = 21/45 (46%)
 Frame = -1

Query: 252 KINKH*A*LYFTFLLIHLTRRVYKGYSVGYLHIGILFINVYVPLY 118
           K++KH   +     ++ +    YK  +V Y  IGI+    Y  ++
Sbjct: 5   KLHKHYVPIILLSKILGIAPISYKNSNVNYSKIGIVQTVAYFVIF 49


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,538
Number of Sequences: 336
Number of extensions: 3373
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14830622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)