Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0817
         (591 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein ...    23   5.6  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   5.6  
U50475-1|AAA93477.1|  207|Anopheles gambiae protein ( Anopheles ...    23   7.4  
AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.     23   7.4  
AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein p...    23   7.4  

>AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein
           protein.
          Length = 705

 Score = 23.4 bits (48), Expect = 5.6
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +1

Query: 478 PPTKLILVIFMYIPFYRTKCI*L*KCRP 561
           PP  L++ + + + FY  KC  +  C+P
Sbjct: 480 PPLLLLVALKLLLVFYVNKCELMYLCQP 507


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.4 bits (48), Expect = 5.6
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 304 LYSRFLYSRHIYGKYT 351
           + SR+ YS H+Y +YT
Sbjct: 196 ILSRYSYSDHVYIRYT 211


>U50475-1|AAA93477.1|  207|Anopheles gambiae protein ( Anopheles
           gambiae putativearylphorin precursor, mRNA, partial cds.
           ).
          Length = 207

 Score = 23.0 bits (47), Expect = 7.4
 Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
 Frame = -3

Query: 202 FNATRLQRI-FGWIPTYWNPFYQCLCTAIPIKSADK----EIFSREYR 74
           FN   ++ + F  + TY++ F   +   +P++SADK     +F+R+ R
Sbjct: 115 FNGVVIKDVTFDKLMTYFDYFDSDVSNVLPMQSADKYFDYAVFARQRR 162


>AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 23.0 bits (47), Expect = 7.4
 Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
 Frame = -3

Query: 202 FNATRLQRI-FGWIPTYWNPFYQCLCTAIPIKSADK----EIFSREYR 74
           FN   ++ + F  + TY++ F   +   +P++SADK     +F+R+ R
Sbjct: 447 FNGVVIKDVTFDKLMTYFDYFDSDVSNVLPMQSADKYFDYAVFARQRR 494


>AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein
           protein.
          Length = 344

 Score = 23.0 bits (47), Expect = 7.4
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 47  NSENANEGSVNKK 9
           N  N NEGS+NK+
Sbjct: 89  NGPNINEGSINKR 101


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 617,390
Number of Sequences: 2352
Number of extensions: 12098
Number of successful extensions: 20
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56768445
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)