Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0816
         (540 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D86984-1|BAA13220.2|  823|Homo sapiens KIAA0231 protein protein.       32   1.5  
BC060782-1|AAH60782.1|  803|Homo sapiens LRRC8B protein protein.       32   1.5  
BC030607-1|AAH30607.1|  803|Homo sapiens leucine rich repeat con...    32   1.5  
AY358112-1|AAQ88479.1|  802|Homo sapiens ITLT6413 protein.             32   1.5  
AF385436-1|AAM43837.1|  803|Homo sapiens T-cell activation leuci...    32   1.5  

>D86984-1|BAA13220.2|  823|Homo sapiens KIAA0231 protein protein.
          Length = 823

 Score = 31.9 bits (69), Expect = 1.5
 Identities = 15/29 (51%), Positives = 20/29 (68%)
 Frame = +3

Query: 279 IYIIYLKRIFASTLLFVLI*TEVQQFLSN 365
           IY +YLK+I    +LFVLI T V  FL++
Sbjct: 274 IYRVYLKQIIVKVILFVLIITYVPYFLTH 302


>BC060782-1|AAH60782.1|  803|Homo sapiens LRRC8B protein protein.
          Length = 803

 Score = 31.9 bits (69), Expect = 1.5
 Identities = 15/29 (51%), Positives = 20/29 (68%)
 Frame = +3

Query: 279 IYIIYLKRIFASTLLFVLI*TEVQQFLSN 365
           IY +YLK+I    +LFVLI T V  FL++
Sbjct: 254 IYRVYLKQIIVKVILFVLIITYVPYFLTH 282


>BC030607-1|AAH30607.1|  803|Homo sapiens leucine rich repeat
           containing 8 family, member B protein.
          Length = 803

 Score = 31.9 bits (69), Expect = 1.5
 Identities = 15/29 (51%), Positives = 20/29 (68%)
 Frame = +3

Query: 279 IYIIYLKRIFASTLLFVLI*TEVQQFLSN 365
           IY +YLK+I    +LFVLI T V  FL++
Sbjct: 254 IYRVYLKQIIVKVILFVLIITYVPYFLTH 282


>AY358112-1|AAQ88479.1|  802|Homo sapiens ITLT6413 protein.
          Length = 802

 Score = 31.9 bits (69), Expect = 1.5
 Identities = 15/29 (51%), Positives = 20/29 (68%)
 Frame = +3

Query: 279 IYIIYLKRIFASTLLFVLI*TEVQQFLSN 365
           IY +YLK+I    +LFVLI T V  FL++
Sbjct: 254 IYRVYLKQIIVKVILFVLIITYVPYFLTH 282


>AF385436-1|AAM43837.1|  803|Homo sapiens T-cell activation leucine
           repeat-rich protein protein.
          Length = 803

 Score = 31.9 bits (69), Expect = 1.5
 Identities = 15/29 (51%), Positives = 20/29 (68%)
 Frame = +3

Query: 279 IYIIYLKRIFASTLLFVLI*TEVQQFLSN 365
           IY +YLK+I    +LFVLI T V  FL++
Sbjct: 254 IYRVYLKQIIVKVILFVLIITYVPYFLTH 282


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,721,795
Number of Sequences: 237096
Number of extensions: 1327810
Number of successful extensions: 1676
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1676
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5251598958
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)