Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0815
(666 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41542-8|AAN39682.1| 437|Caenorhabditis elegans Protein disulfi... 56 2e-08
U41542-7|ABO16445.1| 371|Caenorhabditis elegans Protein disulfi... 56 2e-08
U41542-6|AAK39152.1| 493|Caenorhabditis elegans Protein disulfi... 56 2e-08
Z92970-1|CAB07480.1| 488|Caenorhabditis elegans Hypothetical pr... 35 0.045
AB072567-1|BAB88817.1| 488|Caenorhabditis elegans ceERp57 protein. 35 0.045
Z37139-1|CAA85491.1| 485|Caenorhabditis elegans Hypothetical pr... 33 0.14
U95074-1|AAB94647.1| 485|Caenorhabditis elegans protein disulph... 33 0.14
AF038618-3|AAB92073.1| 572|Caenorhabditis elegans Hypothetical ... 32 0.42
AL031627-13|CAA20964.1| 304|Caenorhabditis elegans Hypothetical... 31 0.56
L15188-9|AAM22024.1| 618|Caenorhabditis elegans Hypothetical pr... 31 0.97
U58737-2|AAM69081.1| 479|Caenorhabditis elegans Hypothetical pr... 29 3.0
U58737-1|ABC48238.1| 474|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z98851-3|CAB11538.2| 659|Caenorhabditis elegans Hypothetical pr... 28 6.8
U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated p... 28 6.8
D45899-1|BAA08309.1| 5071|Caenorhabditis elegans ryanodine recep... 28 6.8
U40411-4|AAC47065.1| 440|Caenorhabditis elegans Temporarily ass... 27 9.1
>U41542-8|AAN39682.1| 437|Caenorhabditis elegans Protein disulfide
isomerase protein2, isoform b protein.
Length = 437
Score = 56.4 bits (130), Expect = 2e-08
Identities = 29/65 (44%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +2
Query: 2 EHTKITSFPTIKLY-SKDNQVHDYNGERTLAGLTKFVETDGEGAEPGPSVTEFEEEEDVP 178
E KI SFPTIK + + N+V DY G+RT+ G TKF+ET+G+ + EEE D
Sbjct: 373 EDVKIQSFPTIKFFPAGSNKVVDYTGDRTIEGFTKFLETNGKEGAGASEEEKAEEEADEE 432
Query: 179 ARDEL 193
EL
Sbjct: 433 GHTEL 437
>U41542-7|ABO16445.1| 371|Caenorhabditis elegans Protein disulfide
isomerase protein2, isoform c protein.
Length = 371
Score = 56.4 bits (130), Expect = 2e-08
Identities = 29/65 (44%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +2
Query: 2 EHTKITSFPTIKLY-SKDNQVHDYNGERTLAGLTKFVETDGEGAEPGPSVTEFEEEEDVP 178
E KI SFPTIK + + N+V DY G+RT+ G TKF+ET+G+ + EEE D
Sbjct: 307 EDVKIQSFPTIKFFPAGSNKVVDYTGDRTIEGFTKFLETNGKEGAGASEEEKAEEEADEE 366
Query: 179 ARDEL 193
EL
Sbjct: 367 GHTEL 371
>U41542-6|AAK39152.1| 493|Caenorhabditis elegans Protein disulfide
isomerase protein2, isoform a protein.
Length = 493
Score = 56.4 bits (130), Expect = 2e-08
Identities = 29/65 (44%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +2
Query: 2 EHTKITSFPTIKLY-SKDNQVHDYNGERTLAGLTKFVETDGEGAEPGPSVTEFEEEEDVP 178
E KI SFPTIK + + N+V DY G+RT+ G TKF+ET+G+ + EEE D
Sbjct: 429 EDVKIQSFPTIKFFPAGSNKVVDYTGDRTIEGFTKFLETNGKEGAGASEEEKAEEEADEE 488
Query: 179 ARDEL 193
EL
Sbjct: 489 GHTEL 493
>Z92970-1|CAB07480.1| 488|Caenorhabditis elegans Hypothetical
protein H06O01.1 protein.
Length = 488
Score = 35.1 bits (77), Expect = 0.045
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 14 ITSFPTIKLYSKDNQVHDYNGERTLAGLTKFVE-TDGEGAEPGPSVTEFEE 163
+ FPT+K++ DY+G R G+ KF+ G ++ +V EFE+
Sbjct: 92 VKGFPTLKIFRNGVPAQDYDGPRDADGIVKFMRGQSGPSSKELKTVAEFEK 142
>AB072567-1|BAB88817.1| 488|Caenorhabditis elegans ceERp57 protein.
Length = 488
Score = 35.1 bits (77), Expect = 0.045
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 14 ITSFPTIKLYSKDNQVHDYNGERTLAGLTKFVE-TDGEGAEPGPSVTEFEE 163
+ FPT+K++ DY+G R G+ KF+ G ++ +V EFE+
Sbjct: 92 VKGFPTLKIFRNGVPAQDYDGPRDADGIVKFMRGQSGPSSKELKTVAEFEK 142
>Z37139-1|CAA85491.1| 485|Caenorhabditis elegans Hypothetical
protein C14B1.1 protein.
Length = 485
Score = 33.5 bits (73), Expect = 0.14
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 11 KITSFPTIKLYSKDNQVH-DYNGERTLAGLTKFVETDGEGAEPGPSVTEFEEE 166
K+ SFPT+KL+ + DY+G+R L +FV A + ++ EE
Sbjct: 432 KVNSFPTLKLWPAGSSTPVDYDGDRNLEKFEEFVNKYAGSASESETASQDHEE 484
>U95074-1|AAB94647.1| 485|Caenorhabditis elegans protein disulphide
isomerase isoformI protein.
Length = 485
Score = 33.5 bits (73), Expect = 0.14
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 11 KITSFPTIKLYSKDNQVH-DYNGERTLAGLTKFVETDGEGAEPGPSVTEFEEE 166
K+ SFPT+KL+ + DY+G+R L +FV A + ++ EE
Sbjct: 432 KVNSFPTLKLWPAGSSTPVDYDGDRNLEKFEEFVNKYAGSASESETASQDHEE 484
>AF038618-3|AAB92073.1| 572|Caenorhabditis elegans Hypothetical
protein F42G8.7 protein.
Length = 572
Score = 31.9 bits (69), Expect = 0.42
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +2
Query: 14 ITSFPTIKLYSKDNQVHDYNGERTLAGLTKFVE 112
IT FPT+K++ + +Y G R + GL +++E
Sbjct: 71 ITKFPTMKVFFYGYMMTEYRGSRQVKGLIEYIE 103
>AL031627-13|CAA20964.1| 304|Caenorhabditis elegans Hypothetical
protein Y102A5C.23 protein.
Length = 304
Score = 31.5 bits (68), Expect = 0.56
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +1
Query: 250 LYYLLFILTNICILFARLFVELFSKLC 330
+YYL+F+LT I + F F LFS LC
Sbjct: 73 IYYLIFVLTCISVFFC--FYSLFSSLC 97
>L15188-9|AAM22024.1| 618|Caenorhabditis elegans Hypothetical
protein C14B9.2 protein.
Length = 618
Score = 30.7 bits (66), Expect = 0.97
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +2
Query: 11 KITSFPTIKLYSKDNQVHDYNGERTLAGLTKFVET 115
+I +PT+K + +DY+G R AG+ ++VE+
Sbjct: 102 EIQGYPTLKFWKDGKGPNDYDGGRDEAGIVEWVES 136
Score = 30.7 bits (66), Expect = 0.97
Identities = 16/64 (25%), Positives = 37/64 (57%)
Frame = +2
Query: 14 ITSFPTIKLYSKDNQVHDYNGERTLAGLTKFVETDGEGAEPGPSVTEFEEEEDVPARDEL 193
++ +PT+K+ ++ + DYNG R AG+ K++ TD + + + ++ E ++D++
Sbjct: 219 VSGYPTMKII-RNGRRFDYNGPREAAGIIKYM-TD-QSKPAAKKLPKLKDVERFMSKDDV 275
Query: 194 *TLG 205
+G
Sbjct: 276 TIIG 279
>U58737-2|AAM69081.1| 479|Caenorhabditis elegans Hypothetical
protein ZK54.1a protein.
Length = 479
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -2
Query: 530 IVFSNFRPPCHKIRFAFEILNGSGFGT*IFVKLTK-R*RYEGWPIFEYF 387
+++S + PP + + A +GS FGT + + L+ + GWP+ +F
Sbjct: 169 VIWSRWAPPMEQTKLATFAFSGSYFGTVVAMPLSAYLGEHFGWPMIFWF 217
>U58737-1|ABC48238.1| 474|Caenorhabditis elegans Hypothetical
protein ZK54.1b protein.
Length = 474
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -2
Query: 530 IVFSNFRPPCHKIRFAFEILNGSGFGT*IFVKLTK-R*RYEGWPIFEYF 387
+++S + PP + + A +GS FGT + + L+ + GWP+ +F
Sbjct: 164 VIWSRWAPPMEQTKLATFAFSGSYFGTVVAMPLSAYLGEHFGWPMIFWF 212
>Z98851-3|CAB11538.2| 659|Caenorhabditis elegans Hypothetical
protein H12I19.4 protein.
Length = 659
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +3
Query: 573 FMSEHFVQPVTQRERELERVHMKLD 647
FM+ F+Q VT++ RELE +H+K D
Sbjct: 556 FMNS-FLQYVTRKPRELETLHLKKD 579
>U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated
protein 68 protein.
Length = 5079
Score = 27.9 bits (59), Expect = 6.8
Identities = 16/58 (27%), Positives = 23/58 (39%)
Frame = +2
Query: 491 LFYDTVDESLRKRWHILWVVSYIRTWIIYVGTFRTTSDPERERVRESSHETGLSGFHP 664
L Y + +R I W + I G F TTS E E R+ + ++ HP
Sbjct: 4444 LLYAVIILFIRAGLAIGWAGYLLLMTIFRFGYFLTTSSEEEEAARQEKEQAKMNNEHP 4501
>D45899-1|BAA08309.1| 5071|Caenorhabditis elegans ryanodine receptor
protein.
Length = 5071
Score = 27.9 bits (59), Expect = 6.8
Identities = 16/58 (27%), Positives = 23/58 (39%)
Frame = +2
Query: 491 LFYDTVDESLRKRWHILWVVSYIRTWIIYVGTFRTTSDPERERVRESSHETGLSGFHP 664
L Y + +R I W + I G F TTS E E R+ + ++ HP
Sbjct: 4436 LLYAVIILFIRAGLAIGWAGYLLLMTIFRFGYFLTTSSEEEEAARQEKEQAKMNNEHP 4493
>U40411-4|AAC47065.1| 440|Caenorhabditis elegans Temporarily
assigned gene nameprotein 320 protein.
Length = 440
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Frame = +2
Query: 14 ITSFPTIKLYSKDNQV---HDYNGERTLAGLTKFVETDGEGAEPGPSVTE 154
I FPTIK ++ + V DY+G R + + + + P P V E
Sbjct: 234 IRGFPTIKYFAPGSDVSDAQDYDGGRQSSDIVAWASARAQENMPAPEVFE 283
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,820,515
Number of Sequences: 27780
Number of extensions: 274205
Number of successful extensions: 742
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 737
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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