Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0815
         (666 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    26   0.37 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             26   0.37 
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    23   2.0  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           22   6.0  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   8.0  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    21   8.0  

>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 525 NDGIFYGLLVTYALG*FMSEHFVQ 596
           N  +F+GLL   A+G + SEHF +
Sbjct: 317 NGVLFFGLLSDLAIGCWNSEHFFE 340


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +2

Query: 95  LTKFVETDGEGAEPGPSVTEFEEEEDVPARDE 190
           L K  + DGEGA+      E EEEED   + E
Sbjct: 266 LRKRRQNDGEGADDRDDDEENEEEEDGRGQSE 297


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +2

Query: 38  LYSKDNQVHDYNGERTLAGLTKFVE 112
           LY  D  +HD++ +  LAG  + VE
Sbjct: 338 LYINDLSMHDFSRDLMLAGTQQSVE 362


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 628 LSNSLSLWVTGCTKCSDINY 569
           LSN L++++ G    S INY
Sbjct: 500 LSNKLAMYLYGSIDSSKINY 519


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 231 WKSHKRAPRPSVYN 190
           W S K  PR S+Y+
Sbjct: 370 WSSQKSEPRRSIYS 383


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +2

Query: 611 RERVRESSHETGLSGFH 661
           R R+ + +++TGL G H
Sbjct: 122 RRRLEQLTNQTGLHGLH 138


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,517
Number of Sequences: 438
Number of extensions: 3507
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20099475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)