Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0814
         (696 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR533543-1|CAG38574.1|  369|Homo sapiens TADA3L protein.               44   7e-04
BC013433-1|AAH13433.1|  432|Homo sapiens transcriptional adaptor...    44   7e-04
BC009240-1|AAH09240.1|  369|Homo sapiens transcriptional adaptor...    44   7e-04
AF069733-1|AAC39903.1|  432|Homo sapiens ADA3-like protein protein.    44   7e-04
AK131077-1|BAC85127.1| 1544|Homo sapiens FLJ00266 protein protein.     31   3.0  
AB046784-1|BAB13390.3| 2432|Homo sapiens KIAA1564 protein protein.     31   3.0  

>CR533543-1|CAG38574.1|  369|Homo sapiens TADA3L protein.
          Length = 369

 Score = 43.6 bits (98), Expect = 7e-04
 Identities = 15/33 (45%), Positives = 24/33 (72%)
 Frame = +2

Query: 509 LPKNNIPYKFWDSVEPYCAPVTLDDIKFFRVLI 607
           +PKN+ P +FW SVEPYCA +T ++++    L+
Sbjct: 145 IPKNDAPNRFWASVEPYCADITSEEVRTLEELL 177



 Score = 33.9 bits (74), Expect = 0.56
 Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
 Frame = +1

Query: 67  KVETCPIPY--IKIQDNAVLLPRFTAVAARSADEPIGMDXXXXXXXXXXXXXCNTALRCR 240
           +++ CP+ +   K  D+  + PR+TAV ARS D+ IG++              + + R R
Sbjct: 3   ELKDCPLQFHDFKSVDHLKVCPRYTAVLARSEDDGIGIEELDTLQLELETLLSSASRRLR 62

Query: 241 YFQSE 255
             ++E
Sbjct: 63  VLEAE 67


>BC013433-1|AAH13433.1|  432|Homo sapiens transcriptional adaptor 3
           (NGG1 homolog, yeast)-like protein.
          Length = 432

 Score = 43.6 bits (98), Expect = 7e-04
 Identities = 15/33 (45%), Positives = 24/33 (72%)
 Frame = +2

Query: 509 LPKNNIPYKFWDSVEPYCAPVTLDDIKFFRVLI 607
           +PKN+ P +FW SVEPYCA +T ++++    L+
Sbjct: 145 IPKNDAPNRFWASVEPYCADITSEEVRTLEELL 177



 Score = 33.9 bits (74), Expect = 0.56
 Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
 Frame = +1

Query: 67  KVETCPIPY--IKIQDNAVLLPRFTAVAARSADEPIGMDXXXXXXXXXXXXXCNTALRCR 240
           +++ CP+ +   K  D+  + PR+TAV ARS D+ IG++              + + R R
Sbjct: 3   ELKDCPLQFHDFKSVDHLKVCPRYTAVLARSEDDGIGIEELDTLQLELETLLSSASRRLR 62

Query: 241 YFQSE 255
             ++E
Sbjct: 63  VLEAE 67


>BC009240-1|AAH09240.1|  369|Homo sapiens transcriptional adaptor 3
           (NGG1 homolog, yeast)-like protein.
          Length = 369

 Score = 43.6 bits (98), Expect = 7e-04
 Identities = 15/33 (45%), Positives = 24/33 (72%)
 Frame = +2

Query: 509 LPKNNIPYKFWDSVEPYCAPVTLDDIKFFRVLI 607
           +PKN+ P +FW SVEPYCA +T ++++    L+
Sbjct: 145 IPKNDAPNRFWASVEPYCADITSEEVRTLEELL 177



 Score = 33.9 bits (74), Expect = 0.56
 Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
 Frame = +1

Query: 67  KVETCPIPY--IKIQDNAVLLPRFTAVAARSADEPIGMDXXXXXXXXXXXXXCNTALRCR 240
           +++ CP+ +   K  D+  + PR+TAV ARS D+ IG++              + + R R
Sbjct: 3   ELKDCPLQFHDFKSVDHLKVCPRYTAVLARSEDDGIGIEELDTLQLELETLLSSASRRLR 62

Query: 241 YFQSE 255
             ++E
Sbjct: 63  VLEAE 67


>AF069733-1|AAC39903.1|  432|Homo sapiens ADA3-like protein protein.
          Length = 432

 Score = 43.6 bits (98), Expect = 7e-04
 Identities = 15/33 (45%), Positives = 24/33 (72%)
 Frame = +2

Query: 509 LPKNNIPYKFWDSVEPYCAPVTLDDIKFFRVLI 607
           +PKN+ P +FW SVEPYCA +T ++++    L+
Sbjct: 145 IPKNDAPNRFWASVEPYCADITSEEVRTLEELL 177



 Score = 33.9 bits (74), Expect = 0.56
 Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
 Frame = +1

Query: 67  KVETCPIPY--IKIQDNAVLLPRFTAVAARSADEPIGMDXXXXXXXXXXXXXCNTALRCR 240
           +++ CP+ +   K  D+  + PR+TAV ARS D+ IG++              + + R R
Sbjct: 3   ELKDCPLQFHDFKSVDHLKVCPRYTAVLARSEDDGIGIEELDTLQLELETLLSSASRRLR 62

Query: 241 YFQSE 255
             ++E
Sbjct: 63  VLEAE 67


>AK131077-1|BAC85127.1| 1544|Homo sapiens FLJ00266 protein protein.
          Length = 1544

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 14/24 (58%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = +3

Query: 624 HHTYLRIPPFR-ERHLLPEVWGRW 692
           HH Y R   FR E+HLL   WGRW
Sbjct: 401 HHAYGRTDCFRVEKHLLVYGWGRW 424


>AB046784-1|BAB13390.3| 2432|Homo sapiens KIAA1564 protein protein.
          Length = 2432

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 14/24 (58%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = +3

Query: 624  HHTYLRIPPFR-ERHLLPEVWGRW 692
            HH Y R   FR E+HLL   WGRW
Sbjct: 1289 HHAYGRTDCFRVEKHLLVYGWGRW 1312


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,333,805
Number of Sequences: 237096
Number of extensions: 1767448
Number of successful extensions: 2837
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2837
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)