Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0814
         (696 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p...    27   9.7  
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p...    27   9.7  
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p...    27   9.7  
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr...    27   9.7  
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr...    27   9.7  
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr...    27   9.7  
X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.     27   9.7  

>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
            protein ZK617.1c protein.
          Length = 6629

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +3

Query: 396  PKVPKFKNFSNASSGSHTYSNDLVNSDNSVKLELSQLA 509
            PK+  F N S  SSG +T+ ++  N+DN+ KL     A
Sbjct: 3064 PKIEWFLNGSPLSSGGNTHIDN--NTDNNTKLTTKSTA 3099


>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
            protein ZK617.1b protein.
          Length = 7158

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +3

Query: 396  PKVPKFKNFSNASSGSHTYSNDLVNSDNSVKLELSQLA 509
            PK+  F N S  SSG +T+ ++  N+DN+ KL     A
Sbjct: 3593 PKIEWFLNGSPLSSGGNTHIDN--NTDNNTKLTTKSTA 3628


>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
            protein ZK617.1a protein.
          Length = 6839

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +3

Query: 396  PKVPKFKNFSNASSGSHTYSNDLVNSDNSVKLELSQLA 509
            PK+  F N S  SSG +T+ ++  N+DN+ KL     A
Sbjct: 3274 PKIEWFLNGSPLSSGGNTHIDN--NTDNNTKLTTKSTA 3309


>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical protein
            ZK617.1c protein.
          Length = 6629

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +3

Query: 396  PKVPKFKNFSNASSGSHTYSNDLVNSDNSVKLELSQLA 509
            PK+  F N S  SSG +T+ ++  N+DN+ KL     A
Sbjct: 3064 PKIEWFLNGSPLSSGGNTHIDN--NTDNNTKLTTKSTA 3099


>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical protein
            ZK617.1b protein.
          Length = 7158

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +3

Query: 396  PKVPKFKNFSNASSGSHTYSNDLVNSDNSVKLELSQLA 509
            PK+  F N S  SSG +T+ ++  N+DN+ KL     A
Sbjct: 3593 PKIEWFLNGSPLSSGGNTHIDN--NTDNNTKLTTKSTA 3628


>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical protein
            ZK617.1a protein.
          Length = 6839

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +3

Query: 396  PKVPKFKNFSNASSGSHTYSNDLVNSDNSVKLELSQLA 509
            PK+  F N S  SSG +T+ ++  N+DN+ KL     A
Sbjct: 3274 PKIEWFLNGSPLSSGGNTHIDN--NTDNNTKLTTKSTA 3309


>X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.
          Length = 6048

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +3

Query: 396  PKVPKFKNFSNASSGSHTYSNDLVNSDNSVKLELSQLA 509
            PK+  F N S  SSG +T+ ++  N+DN+ KL     A
Sbjct: 2483 PKIEWFLNGSPLSSGGNTHIDN--NTDNNTKLTTKSTA 2518


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,700,662
Number of Sequences: 27780
Number of extensions: 274251
Number of successful extensions: 631
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 631
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)