Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0813
         (485 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q10L90 Cluster: Putative uncharacterized protein; n=2; ...    33   2.6  
UniRef50_UPI0000F2C20F Cluster: PREDICTED: hypothetical protein;...    33   4.5  
UniRef50_A0VFC9 Cluster: Putative uncharacterized protein; n=1; ...    32   6.0  
UniRef50_A6NZC3 Cluster: Putative uncharacterized protein; n=1; ...    32   7.9  
UniRef50_Q69LT5 Cluster: Putative uncharacterized protein OSJNBb...    32   7.9  

>UniRef50_Q10L90 Cluster: Putative uncharacterized protein; n=2;
           Oryza sativa|Rep: Putative uncharacterized protein -
           Oryza sativa subsp. japonica (Rice)
          Length = 555

 Score = 33.5 bits (73), Expect = 2.6
 Identities = 19/53 (35%), Positives = 28/53 (52%)
 Frame = +1

Query: 37  KVGTFFLPILFGSELSPALREEQPFRLWVLKHGQLMTSSEVSAGWSHSASSLI 195
           K+  ++LP  FG+    A      F LW+L+H  LM SS++   W H A  L+
Sbjct: 271 KMTKYWLPYTFGALGLSA------FTLWLLRHSSLMGSSDID-NWLHGAKKLL 316


>UniRef50_UPI0000F2C20F Cluster: PREDICTED: hypothetical protein;
           n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
           protein - Monodelphis domestica
          Length = 179

 Score = 32.7 bits (71), Expect = 4.5
 Identities = 26/73 (35%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
 Frame = +2

Query: 95  GKSSPSAFGC*STVNS*PALKFRLVGRI--QHPASSALPRMVPTLCHTGRGPLSLPPPVF 268
           G SSP +    ST+   P  + RL+ +   Q P SS L    P+L H  + P S PPP  
Sbjct: 27  GASSPISVPAPSTIGPSPPRRRRLLPQEPQQSPHSSPLFSSSPSLQHLPKQPPSAPPPRS 86

Query: 269 IYTLGVGQTRPCG 307
                V   RP G
Sbjct: 87  QSRRSVPPQRPRG 99


>UniRef50_A0VFC9 Cluster: Putative uncharacterized protein; n=1;
           Delftia acidovorans SPH-1|Rep: Putative uncharacterized
           protein - Delftia acidovorans SPH-1
          Length = 258

 Score = 32.3 bits (70), Expect = 6.0
 Identities = 14/25 (56%), Positives = 16/25 (64%)
 Frame = +2

Query: 161 RLVGRIQHPASSALPRMVPTLCHTG 235
           RLVGR  HP ++AL R    LCH G
Sbjct: 154 RLVGRRDHPRAAALAREQQALCHQG 178


>UniRef50_A6NZC3 Cluster: Putative uncharacterized protein; n=1;
           Bacteroides capillosus ATCC 29799|Rep: Putative
           uncharacterized protein - Bacteroides capillosus ATCC
           29799
          Length = 241

 Score = 31.9 bits (69), Expect = 7.9
 Identities = 13/18 (72%), Positives = 13/18 (72%)
 Frame = +2

Query: 203 PRMVPTLCHTGRGPLSLP 256
           P  VP LCHTG  PLSLP
Sbjct: 118 PYDVPILCHTGTAPLSLP 135


>UniRef50_Q69LT5 Cluster: Putative uncharacterized protein
           OSJNBb0014G01.39; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           OSJNBb0014G01.39 - Oryza sativa subsp. japonica (Rice)
          Length = 82

 Score = 31.9 bits (69), Expect = 7.9
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +2

Query: 191 SSALPRMVPTLCHTGRGPLSLPPP 262
           ++A+PR+ P LC+   GP + PPP
Sbjct: 25  AAAVPRVSPPLCNAATGPRATPPP 48


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 541,422,069
Number of Sequences: 1657284
Number of extensions: 11280667
Number of successful extensions: 28689
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 27905
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28682
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 28130105105
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)