Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0813
         (485 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058796-1|AAL14025.1|  570|Drosophila melanogaster SD10848p pro...    29   3.4  
AJ271817-4|CAB72252.1|  791|Drosophila melanogaster heavy metal-...    29   3.4  
AF313480-1|AAG29546.1| 2797|Drosophila melanogaster gamma dynein...    29   3.4  
BT029122-1|ABJ17055.1|  570|Drosophila melanogaster IP15679p pro...    29   4.5  
BT025220-1|ABF17911.1|  582|Drosophila melanogaster FI01022p pro...    29   4.5  
BT023803-1|AAZ66310.1|  582|Drosophila melanogaster RE65248p pro...    29   4.5  
AJ297844-1|CAC14279.1|  791|Drosophila melanogaster heavy metal-...    29   4.5  
AE014296-1656|AAN11970.1|  570|Drosophila melanogaster CG3743-PB...    29   4.5  
AE014296-1655|AAF50271.2|  791|Drosophila melanogaster CG3743-PA...    29   4.5  
AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends l...    28   7.8  
AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP mot...    28   7.8  
AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends p...    28   7.8  
AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,...    28   7.8  
AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,...    28   7.8  
AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,...    28   7.8  

>AY058796-1|AAL14025.1|  570|Drosophila melanogaster SD10848p
           protein.
          Length = 570

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
 Frame = +2

Query: 101 SSPSAFGC*-STVNS*PALKFRLVGRIQHPASSALPRMVPTLCHTGRGPLSLPPPV 265
           S+PS+ GC  S V S P          Q PA +A     P+ C +G+G +  PP +
Sbjct: 456 SAPSSAGCCGSGVASTPKPTGGCCSGNQKPAPTATAASSPSCCCSGKGEVQEPPVI 511


>AJ271817-4|CAB72252.1|  791|Drosophila melanogaster heavy
           metal-responsive transcriptionfactor-1 protein.
          Length = 791

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
 Frame = +2

Query: 101 SSPSAFGC*-STVNS*PALKFRLVGRIQHPASSALPRMVPTLCHTGRGPLSLPPPV 265
           S+PS+ GC  S V S P          Q PA +A     P+ C +G+G +  PP +
Sbjct: 677 SAPSSAGCCGSGVASTPKPTGGCCSGNQKPAPTATTASSPSCCCSGKGEVQEPPVI 732


>AF313480-1|AAG29546.1| 2797|Drosophila melanogaster gamma dynein
            protein.
          Length = 2797

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -1

Query: 329  TESEHPTFHMVLSALLLMYI*KPEAGVRAAL 237
            T   HP F + L  + L Y  +P AG+RA L
Sbjct: 2526 TTEPHPKFPITLLQMCLKYTNEPPAGIRAGL 2556


>BT029122-1|ABJ17055.1|  570|Drosophila melanogaster IP15679p
           protein.
          Length = 570

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
 Frame = +2

Query: 101 SSPSAFGC*-STVNS*PALKFRLVGRIQHPASSALPRMVPTLCHTGRGPLSLPPPV 265
           S+PS+ GC  S V S P          Q PA +A     P+ C +G+G +  PP +
Sbjct: 456 SAPSSGGCCGSGVASTPKPTGGCCSGNQKPAPTATAASSPSCCCSGKGEVQEPPVI 511


>BT025220-1|ABF17911.1|  582|Drosophila melanogaster FI01022p
           protein.
          Length = 582

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
 Frame = +2

Query: 101 SSPSAFGC*-STVNS*PALKFRLVGRIQHPASSALPRMVPTLCHTGRGPLSLPPPV 265
           S+PS+ GC  S V S P          Q PA +A     P+ C +G+G +  PP +
Sbjct: 468 SAPSSGGCCGSGVASTPKPTGGCCSGNQKPAPTATAASSPSCCCSGKGEVQEPPVI 523


>BT023803-1|AAZ66310.1|  582|Drosophila melanogaster RE65248p
           protein.
          Length = 582

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
 Frame = +2

Query: 101 SSPSAFGC*-STVNS*PALKFRLVGRIQHPASSALPRMVPTLCHTGRGPLSLPPPV 265
           S+PS+ GC  S V S P          Q PA +A     P+ C +G+G +  PP +
Sbjct: 468 SAPSSGGCCGSGVASTPKPTGGCCSGNQKPAPTATAASSPSCCCSGKGEVQEPPVI 523


>AJ297844-1|CAC14279.1|  791|Drosophila melanogaster heavy
           metal-responsive transcriptionfactor-1 protein.
          Length = 791

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
 Frame = +2

Query: 101 SSPSAFGC*-STVNS*PALKFRLVGRIQHPASSALPRMVPTLCHTGRGPLSLPPPV 265
           S+PS+ GC  S V S P          Q PA +A     P+ C +G+G +  PP +
Sbjct: 677 SAPSSGGCCGSGVASTPKPTGGCCSGNQKPAPTATAASSPSCCCSGKGEVQEPPVI 732


>AE014296-1656|AAN11970.1|  570|Drosophila melanogaster CG3743-PB,
           isoform B protein.
          Length = 570

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
 Frame = +2

Query: 101 SSPSAFGC*-STVNS*PALKFRLVGRIQHPASSALPRMVPTLCHTGRGPLSLPPPV 265
           S+PS+ GC  S V S P          Q PA +A     P+ C +G+G +  PP +
Sbjct: 456 SAPSSGGCCGSGVASTPKPTGGCCSGNQKPAPTATAASSPSCCCSGKGEVQEPPVI 511


>AE014296-1655|AAF50271.2|  791|Drosophila melanogaster CG3743-PA,
           isoform A protein.
          Length = 791

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
 Frame = +2

Query: 101 SSPSAFGC*-STVNS*PALKFRLVGRIQHPASSALPRMVPTLCHTGRGPLSLPPPV 265
           S+PS+ GC  S V S P          Q PA +A     P+ C +G+G +  PP +
Sbjct: 677 SAPSSGGCCGSGVASTPKPTGGCCSGNQKPAPTATAASSPSCCCSGKGEVQEPPVI 732


>AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends long
           isoform protein.
          Length = 5554

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 18/58 (31%), Positives = 29/58 (50%)
 Frame = +1

Query: 130 HGQLMTSSEVSAGWSHSASSLICSTSYGTHTLSHWARAALTPASGFYIYIRSRADKTM 303
           HG+  TSS  S   S S+ S   S+S  +H+ SH   ++   +SG       R+ +T+
Sbjct: 431 HGRSTTSSSRSHSRSPSSYSSSHSSSSSSHSSSHSHASSPVQSSGNCAMAEGRSSRTV 488


>AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP motif
           protein long isoformprotein.
          Length = 5533

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 18/58 (31%), Positives = 29/58 (50%)
 Frame = +1

Query: 130 HGQLMTSSEVSAGWSHSASSLICSTSYGTHTLSHWARAALTPASGFYIYIRSRADKTM 303
           HG+  TSS  S   S S+ S   S+S  +H+ SH   ++   +SG       R+ +T+
Sbjct: 437 HGRSTTSSSRSHSRSPSSYSSSHSSSSSSHSSSHSHASSPVQSSGNCAMAEGRSSRTV 494


>AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends
           protein.
          Length = 5476

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 18/58 (31%), Positives = 29/58 (50%)
 Frame = +1

Query: 130 HGQLMTSSEVSAGWSHSASSLICSTSYGTHTLSHWARAALTPASGFYIYIRSRADKTM 303
           HG+  TSS  S   S S+ S   S+S  +H+ SH   ++   +SG       R+ +T+
Sbjct: 380 HGRSTTSSSRSHSRSPSSYSSSHSSSSSSHSSSHSHASSPVQSSGNCAMAEGRSSRTV 437


>AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,
           isoform C protein.
          Length = 5476

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 18/58 (31%), Positives = 29/58 (50%)
 Frame = +1

Query: 130 HGQLMTSSEVSAGWSHSASSLICSTSYGTHTLSHWARAALTPASGFYIYIRSRADKTM 303
           HG+  TSS  S   S S+ S   S+S  +H+ SH   ++   +SG       R+ +T+
Sbjct: 380 HGRSTTSSSRSHSRSPSSYSSSHSSSSSSHSSSHSHASSPVQSSGNCAMAEGRSSRTV 437


>AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,
           isoform B protein.
          Length = 5533

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 18/58 (31%), Positives = 29/58 (50%)
 Frame = +1

Query: 130 HGQLMTSSEVSAGWSHSASSLICSTSYGTHTLSHWARAALTPASGFYIYIRSRADKTM 303
           HG+  TSS  S   S S+ S   S+S  +H+ SH   ++   +SG       R+ +T+
Sbjct: 437 HGRSTTSSSRSHSRSPSSYSSSHSSSSSSHSSSHSHASSPVQSSGNCAMAEGRSSRTV 494


>AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,
           isoform A protein.
          Length = 5560

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 18/58 (31%), Positives = 29/58 (50%)
 Frame = +1

Query: 130 HGQLMTSSEVSAGWSHSASSLICSTSYGTHTLSHWARAALTPASGFYIYIRSRADKTM 303
           HG+  TSS  S   S S+ S   S+S  +H+ SH   ++   +SG       R+ +T+
Sbjct: 437 HGRSTTSSSRSHSRSPSSYSSSHSSSSSSHSSSHSHASSPVQSSGNCAMAEGRSSRTV 494


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,106,975
Number of Sequences: 53049
Number of extensions: 529411
Number of successful extensions: 1320
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1276
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1320
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1705394754
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)