BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0812
(692 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024838-6|AAF60823.1| 214|Caenorhabditis elegans Hypothetical ... 42 6e-04
AF067216-1|AAC17524.1| 301|Caenorhabditis elegans Hypothetical ... 36 0.036
U23529-1|AAK39160.1| 269|Caenorhabditis elegans Hypothetical pr... 34 0.084
Z81048-4|CAB02844.1| 219|Caenorhabditis elegans Hypothetical pr... 34 0.11
AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical... 34 0.11
AC006642-4|AAF39830.1| 257|Caenorhabditis elegans Hypothetical ... 33 0.19
AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical ... 33 0.26
Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical pr... 32 0.34
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 32 0.34
Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical pr... 32 0.34
Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical pr... 32 0.34
Z93395-1|CAB07704.1| 1160|Caenorhabditis elegans Hypothetical pr... 32 0.34
Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical pr... 32 0.34
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 32 0.34
Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical pr... 32 0.34
Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical pr... 32 0.34
L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membra... 32 0.34
U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical p... 31 0.59
AC025727-1|AAG23391.3| 429|Caenorhabditis elegans Hypothetical ... 31 0.59
U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical pr... 31 1.0
U53154-10|AAC25849.1| 142|Caenorhabditis elegans Hypothetical p... 30 1.4
U80839-14|AAB37920.1| 151|Caenorhabditis elegans Hypothetical p... 29 2.4
Z75549-8|CAD60424.1| 297|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z67882-2|CAA91799.1| 1318|Caenorhabditis elegans Hypothetical pr... 29 3.2
AL117200-6|CAB55058.1| 209|Caenorhabditis elegans Hypothetical ... 29 3.2
AF047663-6|AAC04447.1| 368|Caenorhabditis elegans Hypothetical ... 29 3.2
Z81084-3|CAB03108.1| 174|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z81069-8|CAB02996.2| 600|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z49911-7|CAA90129.1| 861|Caenorhabditis elegans Hypothetical pr... 29 4.2
U56963-8|AAB38121.1| 155|Caenorhabditis elegans Hypothetical pr... 29 4.2
AL021448-4|CAA16278.2| 600|Caenorhabditis elegans Hypothetical ... 29 4.2
AF440506-1|AAL34094.1| 174|Caenorhabditis elegans SKR-2 protein. 29 4.2
AF038608-14|AAT92087.1| 314|Caenorhabditis elegans Serpentine r... 29 4.2
AC006708-26|AAF60419.1| 1724|Caenorhabditis elegans Holocentric ... 29 4.2
AC006708-25|AAK68883.1| 1758|Caenorhabditis elegans Holocentric ... 29 4.2
Z82078-7|CAB04947.3| 801|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z68300-1|CAA92617.1| 185|Caenorhabditis elegans Hypothetical pr... 28 5.5
U61948-1|AAB03144.2| 1432|Caenorhabditis elegans Hypothetical pr... 28 5.5
AF497514-1|AAM33381.1| 801|Caenorhabditis elegans heavy metal t... 28 5.5
AF497513-1|AAM33380.1| 801|Caenorhabditis elegans heavy metal t... 28 5.5
AF490977-1|AAQ06435.1| 801|Caenorhabditis elegans ABC6 protein ... 28 5.5
AF025454-8|AAK68370.1| 334|Caenorhabditis elegans Serpentine re... 28 5.5
Z71177-7|CAI46554.1| 351|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical p... 28 7.3
U64848-11|AAB04889.1| 121|Caenorhabditis elegans Hypothetical p... 28 7.3
U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical p... 28 7.3
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 28 7.3
AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical ... 28 7.3
AC026301-10|AAK68893.1| 1173|Caenorhabditis elegans Hypothetical... 28 7.3
Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr... 27 9.6
U58755-16|AAB00705.2| 512|Caenorhabditis elegans Hypothetical p... 27 9.6
U46753-2|AAA85760.1| 894|Caenorhabditis elegans Hypothetical pr... 27 9.6
U28739-11|AAR25657.1| 487|Caenorhabditis elegans Hypothetical p... 27 9.6
U28739-10|AAR25656.1| 683|Caenorhabditis elegans Hypothetical p... 27 9.6
AF043692-2|AAB97531.1| 253|Caenorhabditis elegans Hypothetical ... 27 9.6
AF016672-5|AAB66120.1| 951|Caenorhabditis elegans Hypothetical ... 27 9.6
AF016672-4|AAD47126.1| 968|Caenorhabditis elegans Hypothetical ... 27 9.6
AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical ... 27 9.6
>AC024838-6|AAF60823.1| 214|Caenorhabditis elegans Hypothetical
protein Y59E9AL.6 protein.
Length = 214
Score = 41.5 bits (93), Expect = 6e-04
Identities = 20/51 (39%), Positives = 30/51 (58%)
Frame = +2
Query: 104 KDEKRNQVKLIDDYGSDHKENETKSNKSDRLKPYKKSPKDENDKCSDNHKQ 256
KD+K+ K DD D KE ++KS KS++ K KKS +++ D D K+
Sbjct: 143 KDDKKEDEKKDDDKKDDKKEAKSKSKKSNKSKKSKKSKREKKDDKKDEDKK 193
Score = 34.3 bits (75), Expect = 0.084
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +2
Query: 92 EGKTKDEKRNQVKLIDDYGSDHKENETKSNKSDRLKPYKKSPKDENDKCSDNHKQ 256
EG KDEK+++ K G D K+ + +K D K KK K ++ K D K+
Sbjct: 92 EGDEKDEKKDEEK---KDGDDKKDEKKDDDKKDEKKSDKKDEKKDDKKEKDEEKK 143
>AF067216-1|AAC17524.1| 301|Caenorhabditis elegans Hypothetical
protein C35E7.9 protein.
Length = 301
Score = 35.5 bits (78), Expect = 0.036
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +2
Query: 92 EGKTKDEKRNQVKLIDDYGSDHKENETKSNKSDRLKPYKKSPKDENDKCSDNHK 253
+ + KD+K+ + K DD D K++E K +K D K KK K E K + K
Sbjct: 81 KSEKKDDKKEEAKKEDD-KKDEKKDEKKEDKKDDKKDDKKEEKKEEKKEDEKEK 133
>U23529-1|AAK39160.1| 269|Caenorhabditis elegans Hypothetical
protein C15B12.2 protein.
Length = 269
Score = 34.3 bits (75), Expect = 0.084
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -2
Query: 280 SLSHFVGHLFMIV*TFIIFILWAFLVWFQTIAFIT 176
S +F GH+F + TFI +++W L+W + T
Sbjct: 53 SSRYFCGHMFWYILTFITYLVWTLLLWIPCLYHYT 87
>Z81048-4|CAB02844.1| 219|Caenorhabditis elegans Hypothetical
protein C41G7.6 protein.
Length = 219
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = +2
Query: 92 EGKTKDEKRNQVKLIDDYGSDHKENETKSNKSDRLKPYKKSPKDENDKCSDNHKQ 256
+GK +DEK++ K ++ D KE++ K +K D K +K KD+ + K+
Sbjct: 126 DGKKEDEKKDDEKKDEEKKDDKKEDDKKGDKKDEKKDDEK--KDDKKEAKSKSKK 178
>AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical
protein F36H12.3 protein.
Length = 335
Score = 33.9 bits (74), Expect = 0.11
Identities = 14/53 (26%), Positives = 30/53 (56%)
Frame = +2
Query: 98 KTKDEKRNQVKLIDDYGSDHKENETKSNKSDRLKPYKKSPKDENDKCSDNHKQ 256
K++D+K ++ + DD D K+++ NK D+ K+ KD+ ++ + K+
Sbjct: 130 KSEDKKEDEKEKDDDKKEDKKDDKKSDNKDDKDDEKKEEKKDDKEEKKEEKKE 182
Score = 31.9 bits (69), Expect = 0.45
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = +2
Query: 68 KGHYAKIIEGKTKDEKRNQVKLIDDYGSDHKENETKSNKSDRLKPYKKSPK---DENDKC 238
K +K EGK D+K + + + D KE + + K D K KK K E DK
Sbjct: 71 KKEKSKKSEGKKSDKKEEKKEEKKEEKEDKKEEKKEEKKEDDKKDEKKDEKKDEKEEDKK 130
Query: 239 SDNHKQ 256
S++ K+
Sbjct: 131 SEDKKE 136
Score = 27.5 bits (58), Expect = 9.6
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = +2
Query: 92 EGKTKDEKRNQVKLIDDYGSDHKENETKSNKSDR---LKPYKKSPKDENDK 235
E K ++EK+ + K + SD KE E K K + K KK K E+DK
Sbjct: 64 EPKKEEEKKEKSKKSEGKKSDKKE-EKKEEKKEEKEDKKEEKKEEKKEDDK 113
>AC006642-4|AAF39830.1| 257|Caenorhabditis elegans Hypothetical
protein F49H12.5 protein.
Length = 257
Score = 33.1 bits (72), Expect = 0.19
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = +2
Query: 98 KTKDEKRNQVKLIDDYGSDHKENETKSNKSDRLKPYKKSPKDENDKCSDNHKQ 256
K KDEK+ + K + D K++E K +K K KK KD+ DK K+
Sbjct: 195 KKKDEKKEEKK---EKKEDKKKDEKKKDKKKEDKKDKKDKKDKKDKKDKKEKK 244
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +2
Query: 92 EGKTKDEKRNQVKLIDDYGSDHKENETKSNKSDR--LKPYKKSPKDENDK 235
E K KDEK+ K D D K+ + K +K D+ K KKS K++ ++
Sbjct: 209 EDKKKDEKKKDKKKEDK--KDKKDKKDKKDKKDKKEKKDDKKSKKNKKEE 256
>AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical
protein E03H12.5 protein.
Length = 210
Score = 32.7 bits (71), Expect = 0.26
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Frame = +2
Query: 104 KDEKRNQVKLIDDYGSDHKENETKSNKSDRLKPYKKS---PKDENDKCSDNHKQ 256
KD+K+++ K D+ + KE KS KS + K KKS KDE DK D+ K+
Sbjct: 131 KDDKKDEKK--DEKKDEKKEKSKKSKKSSKSKKSKKSKREKKDE-DKKEDDKKE 181
Score = 32.3 bits (70), Expect = 0.34
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Frame = +2
Query: 92 EGKTKDEKRNQVKLID--DYGSDHKENETK--SNKSDRLKPYKKSPKDENDKCSDNHKQ 256
E K DEK+++ K D D D K++E K S KS + KKS K + +K ++ K+
Sbjct: 118 EKKDADEKKDEEKKDDKKDEKKDEKKDEKKEKSKKSKKSSKSKKSKKSKREKKDEDKKE 176
>Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical
protein ZC101.2f protein.
Length = 2389
Score = 32.3 bits (70), Expect = 0.34
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1
Query: 314 SSLDLNCNVARKSKSFCRPSVYDCLNIYHFHPLGFSCMVSND 189
+S +LNCN A+ S S C+P+ + C + P F C +ND
Sbjct: 218 NSDELNCN-AKPSSSDCKPTEFQCHDRRQCVPSSFHCDGTND 258
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical
protein ZC101.2e protein.
Length = 3375
Score = 32.3 bits (70), Expect = 0.34
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1
Query: 314 SSLDLNCNVARKSKSFCRPSVYDCLNIYHFHPLGFSCMVSND 189
+S +LNCN A+ S S C+P+ + C + P F C +ND
Sbjct: 218 NSDELNCN-AKPSSSDCKPTEFQCHDRRQCVPSSFHCDGTND 258
>Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical
protein ZC101.2c protein.
Length = 2295
Score = 32.3 bits (70), Expect = 0.34
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1
Query: 314 SSLDLNCNVARKSKSFCRPSVYDCLNIYHFHPLGFSCMVSND 189
+S +LNCN A+ S S C+P+ + C + P F C +ND
Sbjct: 218 NSDELNCN-AKPSSSDCKPTEFQCHDRRQCVPSSFHCDGTND 258
>Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical
protein ZC101.2a protein.
Length = 2482
Score = 32.3 bits (70), Expect = 0.34
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1
Query: 314 SSLDLNCNVARKSKSFCRPSVYDCLNIYHFHPLGFSCMVSND 189
+S +LNCN A+ S S C+P+ + C + P F C +ND
Sbjct: 218 NSDELNCN-AKPSSSDCKPTEFQCHDRRQCVPSSFHCDGTND 258
>Z93395-1|CAB07704.1| 1160|Caenorhabditis elegans Hypothetical
protein ZC101.2b protein.
Length = 1160
Score = 32.3 bits (70), Expect = 0.34
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1
Query: 314 SSLDLNCNVARKSKSFCRPSVYDCLNIYHFHPLGFSCMVSND 189
+S +LNCN A+ S S C+P+ + C + P F C +ND
Sbjct: 218 NSDELNCN-AKPSSSDCKPTEFQCHDRRQCVPSSFHCDGTND 258
>Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical
protein ZC101.2f protein.
Length = 2389
Score = 32.3 bits (70), Expect = 0.34
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1
Query: 314 SSLDLNCNVARKSKSFCRPSVYDCLNIYHFHPLGFSCMVSND 189
+S +LNCN A+ S S C+P+ + C + P F C +ND
Sbjct: 218 NSDELNCN-AKPSSSDCKPTEFQCHDRRQCVPSSFHCDGTND 258
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical
protein ZC101.2e protein.
Length = 3375
Score = 32.3 bits (70), Expect = 0.34
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1
Query: 314 SSLDLNCNVARKSKSFCRPSVYDCLNIYHFHPLGFSCMVSND 189
+S +LNCN A+ S S C+P+ + C + P F C +ND
Sbjct: 218 NSDELNCN-AKPSSSDCKPTEFQCHDRRQCVPSSFHCDGTND 258
>Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical
protein ZC101.2c protein.
Length = 2295
Score = 32.3 bits (70), Expect = 0.34
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1
Query: 314 SSLDLNCNVARKSKSFCRPSVYDCLNIYHFHPLGFSCMVSND 189
+S +LNCN A+ S S C+P+ + C + P F C +ND
Sbjct: 218 NSDELNCN-AKPSSSDCKPTEFQCHDRRQCVPSSFHCDGTND 258
>Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical
protein ZC101.2a protein.
Length = 2482
Score = 32.3 bits (70), Expect = 0.34
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1
Query: 314 SSLDLNCNVARKSKSFCRPSVYDCLNIYHFHPLGFSCMVSND 189
+S +LNCN A+ S S C+P+ + C + P F C +ND
Sbjct: 218 NSDELNCN-AKPSSSDCKPTEFQCHDRRQCVPSSFHCDGTND 258
>L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membrane
proteoglycan protein.
Length = 2481
Score = 32.3 bits (70), Expect = 0.34
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1
Query: 314 SSLDLNCNVARKSKSFCRPSVYDCLNIYHFHPLGFSCMVSND 189
+S +LNCN A+ S S C+P+ + C + P F C +ND
Sbjct: 218 NSDELNCN-AKPSSSDCKPTEFQCHDRRQCVPSSFHCDGTND 258
>U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical
protein C33G8.2 protein.
Length = 390
Score = 31.5 bits (68), Expect = 0.59
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +2
Query: 104 KDEKRNQVKLIDDYGSDHKENETKSNKSDRLKPYKKSPKDENDKCSDNHKQ 256
+D+K+++ K DD +D +E E K D+ K +DENDK D K+
Sbjct: 177 EDKKKDKKKKKDD--NDEEEKEKDKKKKDKKKD-DDDDEDENDKKKDKKKK 224
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = +2
Query: 92 EGKTKDEKRNQVKLIDDYGSDHKENETKSNKSDRLKPYKKSPKDENDKCSDNHKQ 256
+ K KD+K+ + DD D + E K K K KK+ DE DK D K+
Sbjct: 235 DDKKKDKKKKK----DDKEKDDDDEEEKDKKK---KDKKKNDDDEEDKKKDKKKK 282
Score = 28.7 bits (61), Expect = 4.2
Identities = 21/59 (35%), Positives = 28/59 (47%)
Frame = +2
Query: 92 EGKTKDEKRNQVKLIDDYGSDHKENETKSNKSDRLKPYKKSPKDENDKCSDNHKQMAYK 268
E K KD+K+ K DD D EN+ K D+ K KK KD+++ D K K
Sbjct: 193 EEKEKDKKKKDKKKDDD--DDEDEND---KKKDKKK--KKDDKDDDENEDDKKKDKKKK 244
Score = 27.9 bits (59), Expect = 7.3
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +2
Query: 92 EGKTKDEKRNQVKLIDDYGSDHKENETKSNKSDRLKPYKKSPKDENDK 235
E K KD+K+ + DD D+K+ + K K D+ ++ KD+ K
Sbjct: 273 EDKKKDKKKKKDD-DDDEDEDNKKKDKKKKKDDKDDEDEEKEKDKKKK 319
>AC025727-1|AAG23391.3| 429|Caenorhabditis elegans Hypothetical
protein Y73E7A.3 protein.
Length = 429
Score = 31.5 bits (68), Expect = 0.59
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Frame = -2
Query: 208 LVWFQTI----AFITFSL-IFFMIATVVINKLNLISFFIFCFTLDNFSIMTLTKFGRFVF 44
+VW TI A FS+ IF+ + TVV+ K + + F + T D +S++ FG F+F
Sbjct: 276 IVWDGTIVSYFALFAFSMFIFYSLVTVVLQKTSALMFNLSTLTADFYSLL----FGIFMF 331
>U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical
protein ZK354.3 protein.
Length = 312
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +2
Query: 104 KDEKRNQVKLIDDYGSDHKENETKSNKSDRLKPYKKSPKDENDK 235
KDEK+++ K + + K+ E K K + K KK K E+DK
Sbjct: 238 KDEKKDEKK---EAKKEEKKEEKKEEKKEEKKEEKKDDKKEDDK 278
Score = 27.9 bits (59), Expect = 7.3
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 104 KDEKRNQVKLIDDYGSDHKENETKSNKSDRLKPYKKSPKDENDK 235
KD+K+++ D S K ETKS + D+ K+ K E +K
Sbjct: 96 KDDKKSKKTEEKDKLSVKKTQETKSERKDKKDERKEDDKKEENK 139
>U53154-10|AAC25849.1| 142|Caenorhabditis elegans Hypothetical
protein C33G8.3 protein.
Length = 142
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = +2
Query: 92 EGKTKDEKRNQVKLIDDYGSDHKENETKSNKSDRLKPYKKSPKDENDKCSDNHKQMAYK 268
+G KDE + + D D K+N+ + D+ K KK D +D+ + +K+ K
Sbjct: 82 KGNKKDEDEEEEEDKDKKKKDKKKNKDSEEEEDKKKD-KKKKNDSSDESEEENKKRKNK 139
>U80839-14|AAB37920.1| 151|Caenorhabditis elegans Hypothetical
protein ZC204.14 protein.
Length = 151
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = +2
Query: 92 EGKTKDEKRNQVKLIDDYGSDHK-ENETKSNKSDRLKPYKKSPKDENDKCSDNHKQMAYK 268
E K K + V + D S N SN+S ++KP + P D D S H+ +
Sbjct: 23 EQKAKKYANSTVPMEPDTDSGSPFSNRYASNRSSQVKPIRSDPPDSEDLRSKEHQVFMFH 82
Query: 269 M 271
+
Sbjct: 83 L 83
>Z75549-8|CAD60424.1| 297|Caenorhabditis elegans Hypothetical
protein T19C4.9 protein.
Length = 297
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = -2
Query: 454 FYHLLI*SLIHNVVEHLVAFVILEFVAIVVIAFFLSFPFLKLSVFRPLRSIS 299
F+ + I + N ++AFVIL +I L+ F++L F PL IS
Sbjct: 40 FFGIYIFDALMNTFTFIIAFVILRLGSITCYDCLLAPFFMRLGDFAPLSFIS 91
>Z67882-2|CAA91799.1| 1318|Caenorhabditis elegans Hypothetical
protein F22E10.1 protein.
Length = 1318
Score = 29.1 bits (62), Expect = 3.2
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +2
Query: 71 GHYAKIIEGKTKDEKRNQVKLIDDYGSDHKENETKSNKSDRLKPYKKSPKDENDKCSDNH 250
G YAK++E + E + I+D G +H+E + + DRL + S + +
Sbjct: 645 GRYAKLVEAQKFKESDD----IEDNGDEHEEETSTVGRHDRLSSRQVSFHKSCESLASAD 700
Query: 251 KQMAYKMT-*TFSL 289
++ Y T TF+L
Sbjct: 701 LEIGYASTFNTFTL 714
>AL117200-6|CAB55058.1| 209|Caenorhabditis elegans Hypothetical
protein Y50E8A.10 protein.
Length = 209
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 104 KDEKRNQVKLIDDYGSDHKENETKSNKSDRLKPYKKSPKDENDKCSDNHKQ 256
K+EK+ + K D +K+N+ K + +K KKS K + K S+ K+
Sbjct: 64 KEEKKKRSK--DSSKKSNKKNKKKKSADSSMKISKKSSKSKKSKKSEKGKK 112
>AF047663-6|AAC04447.1| 368|Caenorhabditis elegans Hypothetical
protein W09G12.7 protein.
Length = 368
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +2
Query: 92 EGKTKDEKRNQVKLIDDYGSDHKENETKSNKSDRLKPYKKSPKDENDKCSDN 247
+GK K +K+++ DD +++ + D K KKS K +N S +
Sbjct: 124 DGKKKKKKKSKKDSSDDSSDSSDSSDSSDSSDDDKKKKKKSKKSKNKGSSSD 175
>Z81084-3|CAB03108.1| 174|Caenorhabditis elegans Hypothetical
protein F46A9.4 protein.
Length = 174
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 80 AKIIEGKTKDEKRNQVKLIDDYGSDHKENETKSN 181
A +I+GK+ DE R + DD+ ++ +E K N
Sbjct: 136 ANMIKGKSPDEIRRAFNIKDDFTAEEREQIRKEN 169
>Z81069-8|CAB02996.2| 600|Caenorhabditis elegans Hypothetical
protein Y2H9A.4 protein.
Length = 600
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -3
Query: 645 AHHRLCQKIEMFFRVPSSESELSLGLQIFGEFL 547
AHH L + + +V ES+L L +IFGE L
Sbjct: 456 AHHDLVNEFQKSRKVNYEESDLQLEAKIFGEVL 488
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +1
Query: 241 RQS*TDGLQNDLDFLATLQLRSSEEDEKQKALRREMKEKKR 363
++S ++ ND DF L+ + + +E+ K R+E +E+KR
Sbjct: 362 KKSDSENEDNDNDFNEKLKQQQLKNEEELKKKRQEREERKR 402
>Z49911-7|CAA90129.1| 861|Caenorhabditis elegans Hypothetical
protein M28.9 protein.
Length = 861
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 152 DHKENETKSNKSDRLKPYKKSPKDENDKCS 241
+ KE E KS D+ K KKS KD+ ++ S
Sbjct: 720 ESKEKEEKSENKDKKKKKKKSKKDKEEEGS 749
>U56963-8|AAB38121.1| 155|Caenorhabditis elegans Hypothetical
protein T13A10.1 protein.
Length = 155
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +2
Query: 158 KENETKSNKSDRLKPYKK--SPKDENDKCSDNHKQ 256
KE E K KS K+ +PK ENDK S++ K+
Sbjct: 66 KEEEPKKEKSKMKSEVKEPDAPKKENDKTSEDKKE 100
>AL021448-4|CAA16278.2| 600|Caenorhabditis elegans Hypothetical
protein Y2H9A.4 protein.
Length = 600
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -3
Query: 645 AHHRLCQKIEMFFRVPSSESELSLGLQIFGEFL 547
AHH L + + +V ES+L L +IFGE L
Sbjct: 456 AHHDLVNEFQKSRKVNYEESDLQLEAKIFGEVL 488
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +1
Query: 241 RQS*TDGLQNDLDFLATLQLRSSEEDEKQKALRREMKEKKR 363
++S ++ ND DF L+ + + +E+ K R+E +E+KR
Sbjct: 362 KKSDSENEDNDNDFNEKLKQQQLKNEEELKKKRQEREERKR 402
>AF440506-1|AAL34094.1| 174|Caenorhabditis elegans SKR-2 protein.
Length = 174
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 80 AKIIEGKTKDEKRNQVKLIDDYGSDHKENETKSN 181
A +I+GK+ DE R + DD+ ++ +E K N
Sbjct: 136 ANMIKGKSPDEIRRAFNIKDDFTAEEREQIRKEN 169
>AF038608-14|AAT92087.1| 314|Caenorhabditis elegans Serpentine
receptor, class z protein83 protein.
Length = 314
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = -2
Query: 475 FYPQILIFYHLLI*SLIHNVVEHLVAFVILEFVAIVVIAFFLSFPFLKLS 326
FY + + Y L + S+I + + H++ +++ IVVI + L F L+
Sbjct: 63 FYEMVQLAYFLFVFSIILHTLLHVIHEIVIIRFLIVVIFYALCFTMYHLT 112
>AC006708-26|AAF60419.1| 1724|Caenorhabditis elegans Holocentric
chromosome bindingprotein protein 6, isoform a protein.
Length = 1724
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +3
Query: 246 IINRWPTK*LRLSRYITIEIERRGRKTES--FKKGNERKK 359
I+N+ P K + +S +T+ RRG+ TE K+ + RK+
Sbjct: 1591 IVNKSPEKEVNISANVTLRRSRRGQSTEPPVVKENSNRKR 1630
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/54 (22%), Positives = 27/54 (50%)
Frame = +2
Query: 107 DEKRNQVKLIDDYGSDHKENETKSNKSDRLKPYKKSPKDENDKCSDNHKQMAYK 268
D ++N+ + ++ G D +E E +K ++S K + + DN + ++ K
Sbjct: 436 DAEQNEEEDEEEEGEDEEEEEENEQDDVAVKEEEQSDKSDEENDGDNEENVSKK 489
>AC006708-25|AAK68883.1| 1758|Caenorhabditis elegans Holocentric
chromosome bindingprotein protein 6, isoform b protein.
Length = 1758
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +3
Query: 246 IINRWPTK*LRLSRYITIEIERRGRKTES--FKKGNERKK 359
I+N+ P K + +S +T+ RRG+ TE K+ + RK+
Sbjct: 1591 IVNKSPEKEVNISANVTLRRSRRGQSTEPPVVKENSNRKR 1630
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/54 (22%), Positives = 27/54 (50%)
Frame = +2
Query: 107 DEKRNQVKLIDDYGSDHKENETKSNKSDRLKPYKKSPKDENDKCSDNHKQMAYK 268
D ++N+ + ++ G D +E E +K ++S K + + DN + ++ K
Sbjct: 436 DAEQNEEEDEEEEGEDEEEEEENEQDDVAVKEEEQSDKSDEENDGDNEENVSKK 489
>Z82078-7|CAB04947.3| 801|Caenorhabditis elegans Hypothetical
protein W09D6.6 protein.
Length = 801
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +3
Query: 279 LSRYITIEIERRGRKTESFKKGNERKKAITTIATNSRITNAT 404
++ Y+T+ I +T+ ++ NE+ A + IAT+S I T
Sbjct: 380 MALYLTVTISITEWRTQYIREANEKDNATSAIATDSLINYET 421
>Z68300-1|CAA92617.1| 185|Caenorhabditis elegans Hypothetical
protein T22B3.3 protein.
Length = 185
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/50 (26%), Positives = 28/50 (56%)
Frame = +2
Query: 86 IIEGKTKDEKRNQVKLIDDYGSDHKENETKSNKSDRLKPYKKSPKDENDK 235
++E + +D+++ + + + + K+NE K K + K KK K+E+ K
Sbjct: 136 VLENEDEDKEKKEEE--KEEKKEEKKNEEKEEKKEDKKEEKKEEKEEDKK 183
>U61948-1|AAB03144.2| 1432|Caenorhabditis elegans Hypothetical
protein C46A5.4 protein.
Length = 1432
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 161 ENETKSNKSDRLKPYKKSPKDENDKCSDNHKQMAYKMT 274
E++T +K+ + PY +S N KCS +Q A +T
Sbjct: 199 EDDTLQSKNVKCLPYSRSLPVPNPKCSFGQRQQANMVT 236
>AF497514-1|AAM33381.1| 801|Caenorhabditis elegans heavy metal
tolerance factor 1 protein.
Length = 801
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +3
Query: 279 LSRYITIEIERRGRKTESFKKGNERKKAITTIATNSRITNAT 404
++ Y+T+ I +T+ ++ NE+ A + IAT+S I T
Sbjct: 380 MALYLTVTISITEWRTQYIREANEKDNATSAIATDSLINYET 421
>AF497513-1|AAM33380.1| 801|Caenorhabditis elegans heavy metal
tolerance factor 1 protein.
Length = 801
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +3
Query: 279 LSRYITIEIERRGRKTESFKKGNERKKAITTIATNSRITNAT 404
++ Y+T+ I +T+ ++ NE+ A + IAT+S I T
Sbjct: 380 MALYLTVTISITEWRTQYIREANEKDNATSAIATDSLINYET 421
>AF490977-1|AAQ06435.1| 801|Caenorhabditis elegans ABC6 protein
protein.
Length = 801
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +3
Query: 279 LSRYITIEIERRGRKTESFKKGNERKKAITTIATNSRITNAT 404
++ Y+T+ I +T+ ++ NE+ A + IAT+S I T
Sbjct: 380 MALYLTVTISITEWRTQYIREANEKDNATSAIATDSLINYET 421
>AF025454-8|AAK68370.1| 334|Caenorhabditis elegans Serpentine
receptor, class i protein62 protein.
Length = 334
Score = 28.3 bits (60), Expect = 5.5
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = -2
Query: 211 FLVWFQTIA-FITFSLIFFMIATVVIN-KLNLISFFIFCFTLDN-FSIMTLTK 62
+L FQ++ F + F + TVV +ISFFI C L N F +++L K
Sbjct: 172 YLPGFQSLPNFSIYEADAFFVGTVVFAVTCGIISFFILCIILANIFRMLSLLK 224
>Z71177-7|CAI46554.1| 351|Caenorhabditis elegans Hypothetical
protein AC3.10 protein.
Length = 351
Score = 27.9 bits (59), Expect = 7.3
Identities = 9/60 (15%), Positives = 31/60 (51%)
Frame = -2
Query: 232 IIFILWAFLVWFQTIAFITFSLIFFMIATVVINKLNLISFFIFCFTLDNFSIMTLTKFGR 53
++ + L+W+ ++T ++ +++ +T+ ++ F+F ++ + + T+ GR
Sbjct: 31 VLLFIQLILLWWSLYMYVTVTIGYYVQSTIQATIYLIVGSFLFVMSMWSLAKTLFTRVGR 90
>Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical
protein T04A8.13 protein.
Length = 791
Score = 27.9 bits (59), Expect = 7.3
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +2
Query: 98 KTKDEKRNQVKLIDDYGSDHKENETKS-NKSDRLKPYKKSPKDENDKCSDNHKQ 256
K+KD+K+ + K + ++NE K+ K K KK K++ +K D+ ++
Sbjct: 111 KSKDDKKEESKEDKKEKTKTEDNEGKNEEKKKEKKEEKKDEKEKKEKTEDDKEK 164
>U64848-11|AAB04889.1| 121|Caenorhabditis elegans Hypothetical
protein C50E3.1 protein.
Length = 121
Score = 27.9 bits (59), Expect = 7.3
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +2
Query: 518 QGKKNMITGRKNSPKICKPSDSSDSDDGTLKNISIFWHS 634
+G+ N G +N + P+DS DS +GTL + H+
Sbjct: 60 EGEPNGYNGNQNCVYMSLPTDSGDSRNGTLDDAGCEEHT 98
>U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical
protein C52B9.8 protein.
Length = 1336
Score = 27.9 bits (59), Expect = 7.3
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +2
Query: 104 KDEKRNQVKLIDDYGSDHKENETKSNKSDRLKPYKKSPKD-ENDKCSDNHKQ 256
+D+ +KL + + ET +K D+ +P+K+ KD E +K D K+
Sbjct: 1201 EDKNHPPIKLKLNVKFNMPSQETDGSKKDKKEPHKEKEKDKEKEKEEDKGKE 1252
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 27.9 bits (59), Expect = 7.3
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +2
Query: 101 TKDEKRNQVKLIDDYGSDHKENETKSNKSDRLKP-YKKSPKDEND 232
T E+ + +DD+ H E+E + K KP K S DE+D
Sbjct: 373 TTPEQEKTPEPVDDWEMAHSEDEASAQKEKPKKPATKASDADEDD 417
>AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical
protein T06D10.2 protein.
Length = 479
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +1
Query: 301 RSSEEDEKQKALRREMKEKK 360
R EE+EK++A RRE +EKK
Sbjct: 178 RKKEEEEKKEAKRREDEEKK 197
>AC026301-10|AAK68893.1| 1173|Caenorhabditis elegans Hypothetical
protein Y54F10BM.2 protein.
Length = 1173
Score = 27.9 bits (59), Expect = 7.3
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +2
Query: 101 TKDEKRNQVKLIDDYGSDHKENETKSNKSDRLKP-YKKSPKDEND 232
T E+ + +DD+ H E+E + K KP K S DE+D
Sbjct: 373 TTPEQEKTPEPVDDWEMAHSEDEASAQKEKPKKPATKASDADEDD 417
>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical protein
F47A4.2 protein.
Length = 3498
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +2
Query: 92 EGKTKDEKRNQVKLIDDY-GSDHKENETKSNKSDRLKPYKKSPKDENDKCSDNHKQ 256
E K EK+ + K +D ++ EN+ + + ++ K K E +KC D K+
Sbjct: 2215 EEKEAAEKKEESKNAEDEKNKNNAENKKDTKEGEKGKSKDKEKDGEKEKCKDASKK 2270
>U58755-16|AAB00705.2| 512|Caenorhabditis elegans Hypothetical
protein C34D4.1 protein.
Length = 512
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +2
Query: 104 KDEKRNQVKLIDDYGSDHKENETKSNKSDRLKPYKKSPKDENDKCSDNHK 253
K+ + N KL + DH + + K KS + + +K K EN+K + + K
Sbjct: 296 KERRENSAKLYQRWVQDH-DKKAKELKSKKTQQERK--KSENEKTTQDQK 342
>U46753-2|AAA85760.1| 894|Caenorhabditis elegans Hypothetical
protein C34F11.5 protein.
Length = 894
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +1
Query: 265 QNDLDFLATLQ--LRSSEEDEKQKALRREMKEKKR 363
QN++D+L ++ R EE EK K ++ K+KK+
Sbjct: 491 QNNMDWLPAVRKVKRKREEREKSKTIKSSTKKKKK 525
>U28739-11|AAR25657.1| 487|Caenorhabditis elegans Hypothetical
protein C17G10.6b protein.
Length = 487
Score = 27.5 bits (58), Expect = 9.6
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +2
Query: 95 GKTKDEKRNQVKLIDDYGSDHKENETKSNKSDRLKPYKKSPKDENDKCSDN 247
GK K+ + K DD DHK+ + K K + K KK+ D+ D+ D+
Sbjct: 270 GKKSKSKKKKGKKNDDDEDDHKKGK-KGKKGKKGK--KKNKDDDEDEDEDD 317
>U28739-10|AAR25656.1| 683|Caenorhabditis elegans Hypothetical
protein C17G10.6a protein.
Length = 683
Score = 27.5 bits (58), Expect = 9.6
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +2
Query: 95 GKTKDEKRNQVKLIDDYGSDHKENETKSNKSDRLKPYKKSPKDENDKCSDN 247
GK K+ + K DD DHK+ + K K + K KK+ D+ D+ D+
Sbjct: 321 GKKSKSKKKKGKKNDDDEDDHKKGK-KGKKGKKGK--KKNKDDDEDEDEDD 368
>AF043692-2|AAB97531.1| 253|Caenorhabditis elegans Hypothetical
protein C17F3.3 protein.
Length = 253
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 104 KDEKRNQVKLIDDYGSDHKENETKSNKSDRLKPYKKSPKDENDK 235
KD+K+++ D S K ETKS + D+ K+ K E K
Sbjct: 90 KDDKKSKKTEEKDKISVKKTQETKSERKDKKDEKKEDEKKEESK 133
>AF016672-5|AAB66120.1| 951|Caenorhabditis elegans Hypothetical
protein F56D12.6b protein.
Length = 951
Score = 27.5 bits (58), Expect = 9.6
Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
Frame = +2
Query: 107 DEKRNQVKLIDDYGSDHKENETKSNKSDRLKP--YKKSPKDENDKCSDNHKQMAYKMT 274
DEK + ++DD G + T N +D P + DE + + K KMT
Sbjct: 450 DEKPKNLPVVDDEGYIVRTTTTSENNADSSNPTAWSSCSSDEEEDEDELQKSRIRKMT 507
>AF016672-4|AAD47126.1| 968|Caenorhabditis elegans Hypothetical
protein F56D12.6a protein.
Length = 968
Score = 27.5 bits (58), Expect = 9.6
Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
Frame = +2
Query: 107 DEKRNQVKLIDDYGSDHKENETKSNKSDRLKP--YKKSPKDENDKCSDNHKQMAYKMT 274
DEK + ++DD G + T N +D P + DE + + K KMT
Sbjct: 467 DEKPKNLPVVDDEGYIVRTTTTSENNADSSNPTAWSSCSSDEEEDEDELQKSRIRKMT 524
>AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical
protein Y55B1BR.3 protein.
Length = 679
Score = 27.5 bits (58), Expect = 9.6
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +2
Query: 92 EGKT--KDEKRNQVKLIDDYGSDHKENETKSNKSDRLKPYKKSPKDENDKCSDN 247
+GKT K K++ D + E K S R K++ K+E+++ SDN
Sbjct: 519 KGKTPRKSSKKSAAVEESDNEEEDVEESPKKRTSPRKSSKKRAAKEESEESSDN 572
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,940,914
Number of Sequences: 27780
Number of extensions: 255164
Number of successful extensions: 1452
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 1317
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1446
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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