Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0808
         (681 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    23   1.8  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   3.1  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   5.3  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    22   5.3  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    21   7.1  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   7.1  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   7.1  

>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/13 (61%), Positives = 13/13 (100%)
 Frame = +3

Query: 138 WTLGVLYSFQRKI 176
           +T+GV+YSF+R+I
Sbjct: 29  YTVGVVYSFKRRI 41


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +3

Query: 78  FMYT*FFFNAKPGIDRLWTFWTLGVLYSFQRK 173
           F Y  +  + +P     W FW+L  +Y   RK
Sbjct: 553 FCYCYYSISIRPISTLGWFFWSLLRIYELARK 584


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +1

Query: 304 HAKIKHLKCSRC 339
           H KIK  KC +C
Sbjct: 196 HGKIKTFKCKQC 207


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -3

Query: 616 LSSEHNHDRVNILRLKMGLILDFNLCESVCPW 521
           L+ + NH +++   L+    LD  +CES+  W
Sbjct: 311 LTLQENHGKISYNVLQSMKYLDQVVCESLRLW 342


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -2

Query: 305 WNKKCPEYEYRVLHY 261
           W+KK  + EY ++H+
Sbjct: 153 WSKKSKQVEYFLIHW 167


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -2

Query: 305 WNKKCPEYEYRVLHY 261
           W+KK  + EY ++H+
Sbjct: 153 WSKKSKQVEYFLIHW 167


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -1

Query: 369 LLVEKVTYILTTRTF*VFYF 310
           LL EK++YI+ T     FYF
Sbjct: 280 LLDEKLSYIILTSFLNNFYF 299


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,028
Number of Sequences: 336
Number of extensions: 3049
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)