Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0808
         (681 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    24   5.1  
DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor prot...    23   6.7  
AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein p...    23   8.9  

>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +3

Query: 384 LSF*KWIGFTFDRDLSQTYKHNRPLTTSSI 473
           + + KWI  TF+  L +     +PLTT+++
Sbjct: 570 IEYRKWIKDTFEDKLIRQPSLQQPLTTTTV 599


>DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor
           protein.
          Length = 344

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -2

Query: 608 RTQPRPRQYFKTKDGT 561
           RTQP PRQ F    G+
Sbjct: 248 RTQPSPRQSFANSQGS 263


>AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein
           protein.
          Length = 344

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -2

Query: 164 KAVQNAESPKSPKSVNAGFCIKKK 93
           +AV+N  SP++  ++N G   K+K
Sbjct: 79  EAVENIPSPRNGPNINEGSINKRK 102


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 672,100
Number of Sequences: 2352
Number of extensions: 11962
Number of successful extensions: 21
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68577420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)