Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0808
         (681 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77660-7|CAB01174.1|  318|Caenorhabditis elegans Hypothetical pr...    28   7.1  
Z34989-1|CAA84441.1|  404|Caenorhabditis elegans Ndr protein kin...    28   7.1  
U41016-7|ABC71807.1|  476|Caenorhabditis elegans Sensory axon gu...    28   7.1  
U41016-6|ABC71808.1|  474|Caenorhabditis elegans Sensory axon gu...    28   7.1  
AF275634-1|AAF91417.1|  469|Caenorhabditis elegans SAX-1 Ndr pro...    28   7.1  

>Z77660-7|CAB01174.1|  318|Caenorhabditis elegans Hypothetical
           protein F38H4.9 protein.
          Length = 318

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +3

Query: 405 GFTFDRDLSQTYKHNRPLTTSS 470
           G+TF +D+S+T+ H+  LT  S
Sbjct: 226 GYTFGQDISETFNHSNGLTLIS 247


>Z34989-1|CAA84441.1|  404|Caenorhabditis elegans Ndr protein kinase
           protein.
          Length = 404

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +2

Query: 365 NKIKQSTFFLKMDWLYVRSRP*P 433
           ++IKQ  F  ++DW ++R RP P
Sbjct: 315 DEIKQCPFVKRIDWNHIRERPPP 337


>U41016-7|ABC71807.1|  476|Caenorhabditis elegans Sensory axon
           guidance protein 1,isoform a protein.
          Length = 476

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +2

Query: 365 NKIKQSTFFLKMDWLYVRSRP*P 433
           ++IKQ  F  ++DW ++R RP P
Sbjct: 373 DEIKQCPFVKRIDWNHIRERPPP 395


>U41016-6|ABC71808.1|  474|Caenorhabditis elegans Sensory axon
           guidance protein 1,isoform b protein.
          Length = 474

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +2

Query: 365 NKIKQSTFFLKMDWLYVRSRP*P 433
           ++IKQ  F  ++DW ++R RP P
Sbjct: 373 DEIKQCPFVKRIDWNHIRERPPP 395


>AF275634-1|AAF91417.1|  469|Caenorhabditis elegans SAX-1 Ndr
           protein kinase protein.
          Length = 469

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +2

Query: 365 NKIKQSTFFLKMDWLYVRSRP*P 433
           ++IKQ  F  ++DW ++R RP P
Sbjct: 366 DEIKQCPFVKRIDWNHIRERPPP 388


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,828,485
Number of Sequences: 27780
Number of extensions: 286391
Number of successful extensions: 518
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 504
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 518
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)