Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0805
         (600 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    27   0.16 
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   2.0  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   6.0  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   6.0  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    21   7.9  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       21   7.9  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   7.9  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 26.6 bits (56), Expect = 0.16
 Identities = 10/37 (27%), Positives = 20/37 (54%)
 Frame = +2

Query: 458 VTFN*INFKPNYIVFLVDIVM*MHMVYLYCNYYFKLY 568
           + F   N +  Y  + V I   +H+++L C+ YF ++
Sbjct: 46  LVFKCYNLRRIYYFYCVSITFNVHLLFLLCSGYFTVH 82



 Score = 25.8 bits (54), Expect = 0.28
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = +2

Query: 491 YIVFLVDIVM*MHMVYLYCNYYFKLYFFSIV 583
           Y  +   I+  +H+++L C YYF +  F ++
Sbjct: 114 YYFYYAFIIFTVHLLFLLCIYYFVVPLFFLL 144



 Score = 24.6 bits (51), Expect = 0.65
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 512 IVM*MHMVYLYCNYYF 559
           I+  MH+++L C YYF
Sbjct: 273 IIFTMHLLFLLCIYYF 288



 Score = 23.0 bits (47), Expect = 2.0
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = +2

Query: 479 FKPNYIVFLVDIVM*MHMVYLYCNYYFKLYF 571
           F   +I+F + ++    ++ L C YYF   F
Sbjct: 215 FYSAFIIFTIHLLFYCVLIILLCIYYFYYAF 245



 Score = 22.6 bits (46), Expect = 2.6
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = +2

Query: 491 YIVFLVDIVM*MHMVYLYCNYYF 559
           Y  +   I+  +H+++L C Y+F
Sbjct: 147 YYFYCAFIIFTVHLLFLLCIYHF 169



 Score = 22.2 bits (45), Expect = 3.4
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +2

Query: 491 YIVFLVDIVM*MHMVYLYCNYYF 559
           Y  +   I+  +H++ L C YYF
Sbjct: 239 YYFYYAFILFTVHLLLLVCIYYF 261



 Score = 21.4 bits (43), Expect = 6.0
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +2

Query: 524 MHMVYLYCNYYFKLY 568
           MH+++L C  YF L+
Sbjct: 191 MHLLFLLCLDYFTLH 205



 Score = 21.4 bits (43), Expect = 6.0
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +2

Query: 524 MHMVYLYCNYYF 559
           +H+++L C YYF
Sbjct: 204 LHLLFLPCIYYF 215


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -3

Query: 499 NDIVRFKIYLVECDIFSCCLTCASAL 422
           N +  ++I LV   IF CCL   SAL
Sbjct: 238 NSLFGYQIILV---IFDCCLETVSAL 260


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +2

Query: 92  PMFIVKAYLPVNESFGFT 145
           P F      P+N SF FT
Sbjct: 629 PTFTALGLFPINGSFAFT 646


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -3

Query: 109 LHNEHRCTCHLGLF 68
           +H  H+CTC  G +
Sbjct: 356 IHAGHKCTCPEGFY 369


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 215 GGPANGRIRTAGRP 174
           GGP N  +R+ G P
Sbjct: 82  GGPVNDDVRSPGTP 95


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -1

Query: 228 HGSPGRTCQWSNTHC 184
           +G  G+TC   ++HC
Sbjct: 134 NGWKGKTCSLKDSHC 148


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 215 GGPANGRIRTAGRP 174
           GGP N  +R+ G P
Sbjct: 238 GGPVNDDVRSPGTP 251


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,492
Number of Sequences: 336
Number of extensions: 3322
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15143945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)