Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0805
         (600 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-10|CAJ14151.1|  548|Anopheles gambiae putative alkaline...    28   0.27 
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    25   2.5  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    23   5.7  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   10.0 
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   10.0 
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    23   10.0 
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    23   10.0 

>CR954256-10|CAJ14151.1|  548|Anopheles gambiae putative alkaline
           phosphatase protein.
          Length = 548

 Score = 27.9 bits (59), Expect = 0.27
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +3

Query: 390 LFSSTHVPHHIKADAQVRQQLNMSHST 470
           LFSS H+P+H+ AD Q    L+   ST
Sbjct: 333 LFSSKHLPYHLDADEQQIPTLSEMVST 359


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +1

Query: 82  GRYTYVHCEGLPTC 123
           GRYT  +CE  PTC
Sbjct: 664 GRYTGRYCEKCPTC 677


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = +3

Query: 108 RPTYLSMSRSVLL-PICVPTPADRPSRSAYSTIGRSSLETRANLRASPT 251
           RP  L+   S L  P  +P  A RP   +  +  RS+ + RAN +   T
Sbjct: 586 RPNALASPASPLKSPSKIPGLARRPENISSESRSRSTSKQRANAKTPET 634


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = -2

Query: 266  VSCTRCRACSEVRTGLQGGPANGRIRTAGRPVRRCWNANRQ*N 138
            +S T   A + + T L G P +G  +T  +P + C N++   N
Sbjct: 1670 MSATSMAASAAMHTVLSG-PNDGSSQTEMKPKQNCVNSSNTYN 1711


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = +2

Query: 155 RSNTGGQAFPQCVFDHWQVLPGDPCE 232
           + N  G+   +C   +W ++ G+ CE
Sbjct: 912 KPNVIGRTCNECKNGYWNIVSGNGCE 937


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 74  TLRKRDHDVCSVHRRYHP 21
           T+ +  H+ CS H R HP
Sbjct: 385 TVGQWKHEGCSSHERLHP 402


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 10/35 (28%), Positives = 21/35 (60%)
 Frame = +3

Query: 132 RSVLLPICVPTPADRPSRSAYSTIGRSSLETRANL 236
           +++ + +C+PTP +R + + Y  + R  + T  NL
Sbjct: 227 KALTVRLCLPTPPNRLTNNGYWQL-RPHVLTERNL 260


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 627,737
Number of Sequences: 2352
Number of extensions: 14298
Number of successful extensions: 24
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58029966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)