Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0804
         (631 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    23   2.8  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    23   2.8  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    22   3.7  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   8.5  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   8.5  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   8.5  

>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = +2

Query: 260 IGWK-WITIRTR*GRSE-FGGTSARLGLRSKSVIKFMEGRIKEEYF 391
           I W+ ++ +  R  R+E + G   R+  R K  +KF +G +   YF
Sbjct: 535 IAWRAFLAVLKR--RTEIYKGLIDRIKSREKLTMKFHDGEVDASYF 578


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 388 IFLLNSTLHKFNDAFG 341
           +FLL+  +  FND FG
Sbjct: 197 LFLLSQAVETFNDIFG 212


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 388 IFLLNSTLHKFNDAFG 341
           IF+L  ++  FND FG
Sbjct: 102 IFILKESVDTFNDIFG 117


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +3

Query: 456 WLLEPIDIYNVNAPPTLRYK 515
           WL  P  + N   P +LR+K
Sbjct: 7   WLTPPHSLGNTVTPVSLRFK 26


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 382 LLNSTLHKFNDAFGS 338
           LL+ T+  FND FG+
Sbjct: 227 LLSETVALFNDVFGT 241


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 382 LLNSTLHKFNDAFGS 338
           LL+ T+  FND FG+
Sbjct: 227 LLSETVALFNDVFGT 241


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,423
Number of Sequences: 336
Number of extensions: 3462
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16188355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)