Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0801
         (686 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    56   8e-10
U21917-1|AAA73920.1|  271|Anopheles gambiae serine protease prot...    26   1.3  
AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    25   2.2  
AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulf...    24   3.9  
AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulf...    24   3.9  
AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reduct...    24   3.9  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   6.8  
AY805323-1|AAV66543.1|  459|Anopheles gambiae beta subunit-GABA-...    23   6.8  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   6.8  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 56.4 bits (130), Expect = 8e-10
 Identities = 27/54 (50%), Positives = 34/54 (62%)
 Frame = +3

Query: 255 LCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGLGTSGHALLFLRPE 416
           + T VAARGLDI  V+ +V YD P    +Y+HR+GRT R +G  G A  F  PE
Sbjct: 478 IATSVAARGLDIKNVNHVVNYDLPKSIDDYVHRIGRTGR-VGNKGRATSFYDPE 530



 Score = 25.0 bits (52), Expect = 2.2
 Identities = 16/58 (27%), Positives = 22/58 (37%)
 Frame = +1

Query: 16  LEQGYIVCPSEKRMMVLFTFLKKNRKKKVMVFFSTCMSVKYHHELFNYIDLPVMSIHG 189
           +EQ   +    K+   L   L     K  +VF  T  +  Y   L +    P  SIHG
Sbjct: 398 VEQTIHLVEKFKKRKKLEEILNGGNPKGTLVFVETKRNADYLASLMSETQFPTTSIHG 455


>U21917-1|AAA73920.1|  271|Anopheles gambiae serine protease
           protein.
          Length = 271

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -2

Query: 622 QCQKSFFQVMRIIGSQVTFEGFF 554
           Q ++ FFQ  RI+G  V  EG F
Sbjct: 39  QARRPFFQGARIVGGSVASEGQF 61


>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
 Frame = -1

Query: 176 ITGRSI*LKSS--WWYLTDIQVEKNTITFFF 90
           +  RS+ +K S  WW   +I V  + I+FFF
Sbjct: 353 VVKRSMDIKESDSWWRRNEITVVMSLISFFF 383


>AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 529

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +3

Query: 246 WYTLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVG 359
           W TL   V      I +V+W+ + D  D   EY++ +G
Sbjct: 125 WATLTESVQNH---IKSVNWVTRVDLRDQKVEYVNGLG 159


>AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 505

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +3

Query: 246 WYTLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVG 359
           W TL   V      I +V+W+ + D  D   EY++ +G
Sbjct: 101 WATLTESVQNH---IKSVNWVTRVDLRDQKVEYVNGLG 135


>AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reductase
           protein.
          Length = 502

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +3

Query: 246 WYTLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVG 359
           W TL   V      I +V+W+ + D  D   EY++ +G
Sbjct: 98  WATLTESVQNH---IKSVNWVTRVDLRDQKVEYVNGLG 132


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 124  MSVKYHHELFNYIDLPV 174
            M  K  H LF Y+D+PV
Sbjct: 1007 MLTKAVHNLFQYMDIPV 1023


>AY805323-1|AAV66543.1|  459|Anopheles gambiae beta
           subunit-GABA-A-gated chloride channelprotein.
          Length = 459

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -2

Query: 340 SFGSSGGSYCTIQSTAGMSRPRAATSVQR 254
           S+GSS  S    +S+ G  RP+   +++R
Sbjct: 387 SYGSSNRSGLRYRSSRGQGRPKMLHAIKR 415


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +3

Query: 402  FLRPEELGFLRYLKQSRVTLNEFEFSWN 485
            F RP E   LR++  + V  ++  FSWN
Sbjct: 1591 FDRPFESVALRFVYNTSVDDSKLSFSWN 1618


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 728,130
Number of Sequences: 2352
Number of extensions: 15214
Number of successful extensions: 28
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)