Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0800
         (696 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    22   5.5  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    22   5.5  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    21   9.6  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   9.6  

>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 545 FQRVLNNMVCVDFQWIR 495
           FQ +LN+  C   +WIR
Sbjct: 93  FQVILNSCFCDPAKWIR 109


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 545 FQRVLNNMVCVDFQWIR 495
           FQ +LN+  C   +WIR
Sbjct: 93  FQVILNSCFCDPAKWIR 109


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +3

Query: 177 FPASGGIEKIHGKIFSF 227
           FP+ GG   IH  I  F
Sbjct: 237 FPSPGGFPSIHNSINPF 253


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 11/37 (29%), Positives = 16/37 (43%)
 Frame = -2

Query: 518 CVDFQWIRSESVSEHHAFPVRVELVVIGRHHVRSGRA 408
           C +      ES+  ++  P   ELV     HV+S  A
Sbjct: 312 CQNLDKAHQESIIMNNILPCVKELVADPNQHVKSALA 348


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,927
Number of Sequences: 336
Number of extensions: 3112
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)