Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0800
         (696 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            24   5.3  
EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.       23   7.0  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   9.2  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 10/32 (31%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = -2

Query: 536  VLNNMVCVDFQWIRSESVSEH-HAFPVRVELV 444
            + NN + + F+W+ S S+ E+ + F  RV ++
Sbjct: 3099 MFNNWIKLPFEWLFSTSMRENENEFDKRVSMI 3130


>EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.
          Length = 661

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 49  YDSDEDTTDGTWEHKL 96
           YD+DED  +G  +H+L
Sbjct: 419 YDTDEDVINGVPDHQL 434


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = +3

Query: 312  LGWNEGQGLGVEGS 353
            L  +EG+G+GVEGS
Sbjct: 966  LALDEGKGVGVEGS 979


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 676,691
Number of Sequences: 2352
Number of extensions: 12842
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70668195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)