Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0800
(696 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000263-13|AAO21393.1| 695|Caenorhabditis elegans Hypothetical... 55 6e-08
AF000263-12|AAO21392.1| 838|Caenorhabditis elegans Hypothetical... 55 6e-08
AF000263-11|AAL77184.1| 866|Caenorhabditis elegans Hypothetical... 55 6e-08
AF000263-8|AAK21461.1| 924|Caenorhabditis elegans Hypothetical ... 55 6e-08
AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical ... 55 6e-08
AL032649-4|CAA21703.2| 511|Caenorhabditis elegans Hypothetical ... 51 9e-07
AL032649-3|CAA21702.2| 502|Caenorhabditis elegans Hypothetical ... 51 9e-07
Z81094-5|CAB03149.2| 675|Caenorhabditis elegans Hypothetical pr... 40 0.001
AF536544-1|AAN77185.1| 675|Caenorhabditis elegans SR-related CT... 40 0.001
Z49908-1|CAA90093.1| 816|Caenorhabditis elegans Hypothetical pr... 39 0.004
DQ342049-1|ABC69941.1| 830|Caenorhabditis elegans STIP protein. 39 0.004
AF106592-4|AAK21366.1| 786|Caenorhabditis elegans Hypothetical ... 37 0.016
Z68319-3|CAA92701.1| 339|Caenorhabditis elegans Hypothetical pr... 36 0.021
AL132949-11|CAB70104.2| 927|Caenorhabditis elegans Hypothetical... 33 0.19
U41007-19|AAA82274.1| 432|Caenorhabditis elegans Hypothetical p... 33 0.26
AF003384-11|AAL08042.1| 487|Caenorhabditis elegans Hypothetical... 32 0.34
AF003384-10|AAB54241.3| 351|Caenorhabditis elegans Hypothetical... 32 0.34
Z32683-1|CAA83621.1| 812|Caenorhabditis elegans Hypothetical pr... 31 0.60
Z46934-6|CAA87045.3| 371|Caenorhabditis elegans Hypothetical pr... 31 0.79
AF077533-2|AAP40529.1| 972|Caenorhabditis elegans Hypothetical ... 30 1.4
AF077533-1|AAZ91357.1| 1126|Caenorhabditis elegans Hypothetical ... 30 1.4
AC025722-1|AAK68507.1| 554|Caenorhabditis elegans Hypothetical ... 30 1.8
Z81074-6|CAE46669.1| 475|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z74045-4|CAA98554.2| 924|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z74032-11|CAA98469.2| 924|Caenorhabditis elegans Hypothetical p... 28 5.5
Z70310-2|CAA94367.1| 462|Caenorhabditis elegans Hypothetical pr... 28 5.5
U00041-2|AAA50670.1| 128|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z81074-7|CAB03042.1| 495|Caenorhabditis elegans Hypothetical pr... 28 7.3
AF022983-4|AAB69944.1| 387|Caenorhabditis elegans Hypothetical ... 28 7.3
AC024759-3|AAK68433.1| 355|Caenorhabditis elegans Hypothetical ... 28 7.3
AC024759-2|AAM97964.1| 376|Caenorhabditis elegans Hypothetical ... 28 7.3
AC024759-1|AAK73907.1| 376|Caenorhabditis elegans Hypothetical ... 28 7.3
AC006731-1|AAF60483.1| 4900|Caenorhabditis elegans Temporarily a... 28 7.3
Z79755-7|CAB02103.1| 466|Caenorhabditis elegans Hypothetical pr... 27 9.7
>AF000263-13|AAO21393.1| 695|Caenorhabditis elegans Hypothetical
protein T08B2.5g protein.
Length = 695
Score = 54.8 bits (126), Expect = 6e-08
Identities = 28/65 (43%), Positives = 41/65 (63%)
Frame = +3
Query: 228 EKWQRARPEDYKEFKLKEDNVGFKMLQKLGWNEGQGLGVEGSGIVEPINKAKQPVQNLGL 407
E+ R E+ + L E N+G ++L+ +GW EGQG+G GIV PI +A++ VQ GL
Sbjct: 607 EETIRKVSEEASKRPLDESNIGNRLLKSMGWKEGQGVGKHAQGIVNPI-EAERFVQGAGL 665
Query: 408 GASTS 422
GA+ S
Sbjct: 666 GAAGS 670
>AF000263-12|AAO21392.1| 838|Caenorhabditis elegans Hypothetical
protein T08B2.5f protein.
Length = 838
Score = 54.8 bits (126), Expect = 6e-08
Identities = 28/65 (43%), Positives = 41/65 (63%)
Frame = +3
Query: 228 EKWQRARPEDYKEFKLKEDNVGFKMLQKLGWNEGQGLGVEGSGIVEPINKAKQPVQNLGL 407
E+ R E+ + L E N+G ++L+ +GW EGQG+G GIV PI +A++ VQ GL
Sbjct: 750 EETIRKVSEEASKRPLDESNIGNRLLKSMGWKEGQGVGKHAQGIVNPI-EAERFVQGAGL 808
Query: 408 GASTS 422
GA+ S
Sbjct: 809 GAAGS 813
>AF000263-11|AAL77184.1| 866|Caenorhabditis elegans Hypothetical
protein T08B2.5c protein.
Length = 866
Score = 54.8 bits (126), Expect = 6e-08
Identities = 28/65 (43%), Positives = 41/65 (63%)
Frame = +3
Query: 228 EKWQRARPEDYKEFKLKEDNVGFKMLQKLGWNEGQGLGVEGSGIVEPINKAKQPVQNLGL 407
E+ R E+ + L E N+G ++L+ +GW EGQG+G GIV PI +A++ VQ GL
Sbjct: 778 EETIRKVSEEASKRPLDESNIGNRLLKSMGWKEGQGVGKHAQGIVNPI-EAERFVQGAGL 836
Query: 408 GASTS 422
GA+ S
Sbjct: 837 GAAGS 841
>AF000263-8|AAK21461.1| 924|Caenorhabditis elegans Hypothetical
protein T08B2.5a protein.
Length = 924
Score = 54.8 bits (126), Expect = 6e-08
Identities = 28/65 (43%), Positives = 41/65 (63%)
Frame = +3
Query: 228 EKWQRARPEDYKEFKLKEDNVGFKMLQKLGWNEGQGLGVEGSGIVEPINKAKQPVQNLGL 407
E+ R E+ + L E N+G ++L+ +GW EGQG+G GIV PI +A++ VQ GL
Sbjct: 836 EETIRKVSEEASKRPLDESNIGNRLLKSMGWKEGQGVGKHAQGIVNPI-EAERFVQGAGL 894
Query: 408 GASTS 422
GA+ S
Sbjct: 895 GAAGS 899
>AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical
protein T08B2.5b protein.
Length = 925
Score = 54.8 bits (126), Expect = 6e-08
Identities = 28/65 (43%), Positives = 41/65 (63%)
Frame = +3
Query: 228 EKWQRARPEDYKEFKLKEDNVGFKMLQKLGWNEGQGLGVEGSGIVEPINKAKQPVQNLGL 407
E+ R E+ + L E N+G ++L+ +GW EGQG+G GIV PI +A++ VQ GL
Sbjct: 837 EETIRKVSEEASKRPLDESNIGNRLLKSMGWKEGQGVGKHAQGIVNPI-EAERFVQGAGL 895
Query: 408 GASTS 422
GA+ S
Sbjct: 896 GAAGS 900
>AL032649-4|CAA21703.2| 511|Caenorhabditis elegans Hypothetical
protein Y55D9A.2b protein.
Length = 511
Score = 50.8 bits (116), Expect = 9e-07
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +3
Query: 273 LKEDNVGFKMLQKLGWNEGQGLGVEGSGIVEPI-NKAKQPVQNLGLGASTSDVVSPDDDE 449
L NVGFK+L+ +GW+EGQGLG E G VEP+ + K + LG S D
Sbjct: 431 LDSGNVGFKLLKSMGWSEGQGLGKEKQGHVEPVATEVKNNRKGLGANEKEPPTKSYKDQV 490
Query: 450 FDAYRKR 470
+ ++R
Sbjct: 491 LEKTKQR 497
>AL032649-3|CAA21702.2| 502|Caenorhabditis elegans Hypothetical
protein Y55D9A.2a protein.
Length = 502
Score = 50.8 bits (116), Expect = 9e-07
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +3
Query: 273 LKEDNVGFKMLQKLGWNEGQGLGVEGSGIVEPI-NKAKQPVQNLGLGASTSDVVSPDDDE 449
L NVGFK+L+ +GW+EGQGLG E G VEP+ + K + LG S D
Sbjct: 431 LDSGNVGFKLLKSMGWSEGQGLGKEKQGHVEPVATEVKNNRKGLGANEKEPPTKSYKDQV 490
Query: 450 FDAYRKR 470
+ ++R
Sbjct: 491 LEKTKQR 497
>Z81094-5|CAB03149.2| 675|Caenorhabditis elegans Hypothetical
protein F58G11.5 protein.
Length = 675
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Frame = +3
Query: 273 LKEDNVGFKMLQKLGWNEGQGLGVEGSGIVEPINKAKQPVQN---LGLGAS 416
L DN G +++ K+GW G+GLG SGIV+P++ + +N +GLG S
Sbjct: 602 LSYDNKGAQLMAKMGWG-GKGLGANESGIVDPVSGGEVRNRNEQFMGLGRS 651
>AF536544-1|AAN77185.1| 675|Caenorhabditis elegans SR-related CTD
associated factor 6 protein.
Length = 675
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Frame = +3
Query: 273 LKEDNVGFKMLQKLGWNEGQGLGVEGSGIVEPINKAKQPVQN---LGLGAS 416
L DN G +++ K+GW G+GLG SGIV+P++ + +N +GLG S
Sbjct: 602 LSYDNKGAQLMAKMGWG-GKGLGANESGIVDPVSGGEVRNRNEQFMGLGRS 651
>Z49908-1|CAA90093.1| 816|Caenorhabditis elegans Hypothetical
protein C07E3.1a protein.
Length = 816
Score = 38.7 bits (86), Expect = 0.004
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = +3
Query: 297 KMLQKLGWNEGQGLGVEGSGIVEPI 371
KM+Q +G+ G+GLG +G GIVEP+
Sbjct: 145 KMMQAMGYKPGEGLGAQGQGIVEPV 169
>DQ342049-1|ABC69941.1| 830|Caenorhabditis elegans STIP protein.
Length = 830
Score = 38.7 bits (86), Expect = 0.004
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = +3
Query: 297 KMLQKLGWNEGQGLGVEGSGIVEPI 371
KM+Q +G+ G+GLG +G GIVEP+
Sbjct: 159 KMMQAMGYKPGEGLGAQGQGIVEPV 183
>AF106592-4|AAK21366.1| 786|Caenorhabditis elegans Hypothetical
protein D1037.1 protein.
Length = 786
Score = 36.7 bits (81), Expect = 0.016
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +3
Query: 288 VGFKMLQKLGWNEGQGLGVEGSGIVEPI 371
+G ML+K+GW G+GLG + +G +EP+
Sbjct: 640 IGRLMLEKMGWRPGEGLGKDATGNLEPL 667
>Z68319-3|CAA92701.1| 339|Caenorhabditis elegans Hypothetical
protein T23G7.3 protein.
Length = 339
Score = 36.3 bits (80), Expect = 0.021
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +3
Query: 267 FKLKEDNVGFKMLQKLGWNEGQGLGVEGSGIVEPINKAKQPVQNLGLGA 413
+K + + K+++K+GW+EG GLG G + + K K GLGA
Sbjct: 22 WKNDDQKLSKKLMEKMGWSEGDGLGRNRQGNADSV-KLKANTSGRGLGA 69
>AL132949-11|CAB70104.2| 927|Caenorhabditis elegans Hypothetical
protein Y53F4B.13 protein.
Length = 927
Score = 33.1 bits (72), Expect = 0.19
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +3
Query: 288 VGFKMLQKLGWNEGQGLGVEGSGIVEPINKAKQPVQNLGLGASTSDVVSPDDDE 449
V +++ +G G+GLG G GI EPI + Q + GLG + + D +E
Sbjct: 89 VAERLMAAMGHKAGEGLGKHGQGISEPIASSTQRGRT-GLGHNAGKATARDFNE 141
>U41007-19|AAA82274.1| 432|Caenorhabditis elegans Hypothetical
protein C33H5.17 protein.
Length = 432
Score = 32.7 bits (71), Expect = 0.26
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 288 VGFKMLQKLGWNEGQGLGVEGSGIVEPI 371
VG K++ K+G+ G+GLG GIV I
Sbjct: 251 VGMKLMMKMGYKVGEGLGKRSDGIVHAI 278
>AF003384-11|AAL08042.1| 487|Caenorhabditis elegans Hypothetical
protein K07B1.7b protein.
Length = 487
Score = 32.3 bits (70), Expect = 0.34
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 279 EDNVGFKMLQKLGWNEGQGLGVEGSGIVEPI 371
+ +G ML K+GW G GLG G V P+
Sbjct: 396 QKGIGGSMLAKMGWKPGTGLGKNEQGRVVPV 426
>AF003384-10|AAB54241.3| 351|Caenorhabditis elegans Hypothetical
protein K07B1.7a protein.
Length = 351
Score = 32.3 bits (70), Expect = 0.34
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 279 EDNVGFKMLQKLGWNEGQGLGVEGSGIVEPI 371
+ +G ML K+GW G GLG G V P+
Sbjct: 244 QKGIGGSMLAKMGWKPGTGLGKNEQGRVVPV 274
>Z32683-1|CAA83621.1| 812|Caenorhabditis elegans Hypothetical
protein R07E5.1 protein.
Length = 812
Score = 31.5 bits (68), Expect = 0.60
Identities = 9/21 (42%), Positives = 18/21 (85%)
Frame = +3
Query: 282 DNVGFKMLQKLGWNEGQGLGV 344
+++G +ML+ +GW EG+G+G+
Sbjct: 146 NSIGVRMLRSMGWREGRGIGL 166
>Z46934-6|CAA87045.3| 371|Caenorhabditis elegans Hypothetical
protein ZK1320.7 protein.
Length = 371
Score = 31.1 bits (67), Expect = 0.79
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +3
Query: 285 NVGFKMLQKLGWNEGQGLGVEGSGIVEPINKAKQPVQNLGLGA 413
N+G++++ GW E QGLG G PI + GLGA
Sbjct: 265 NIGYRLMCASGWTEEQGLGRNSDGQRFPIRTILKR-NRAGLGA 306
>AF077533-2|AAP40529.1| 972|Caenorhabditis elegans Hypothetical
protein F54G2.1b protein.
Length = 972
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/87 (22%), Positives = 40/87 (45%)
Frame = +3
Query: 285 NVGFKMLQKLGWNEGQGLGVEGSGIVEPINKAKQPVQNLGLGASTSDVVSPDDDEFDAYR 464
+V M + L ++ + + S + + + K Q L L D+++ FD+Y
Sbjct: 398 DVHLAMCRWLAFHSMIHIDISFSLLYKTLQKIIDKWQPLTLDKEEEDMLTDSFSSFDSYC 457
Query: 465 KRMMLAYRFRPNPLKIHADHIIKNSLK 545
KRMM+ +R + P K ++ + +K
Sbjct: 458 KRMMIEHREKFTPSKRNSGEEFSSLIK 484
>AF077533-1|AAZ91357.1| 1126|Caenorhabditis elegans Hypothetical
protein F54G2.1a protein.
Length = 1126
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/87 (22%), Positives = 40/87 (45%)
Frame = +3
Query: 285 NVGFKMLQKLGWNEGQGLGVEGSGIVEPINKAKQPVQNLGLGASTSDVVSPDDDEFDAYR 464
+V M + L ++ + + S + + + K Q L L D+++ FD+Y
Sbjct: 382 DVHLAMCRWLAFHSMIHIDISFSLLYKTLQKIIDKWQPLTLDKEEEDMLTDSFSSFDSYC 441
Query: 465 KRMMLAYRFRPNPLKIHADHIIKNSLK 545
KRMM+ +R + P K ++ + +K
Sbjct: 442 KRMMIEHREKFTPSKRNSGEEFSSLIK 468
>AC025722-1|AAK68507.1| 554|Caenorhabditis elegans Hypothetical
protein Y50D4C.2 protein.
Length = 554
Score = 29.9 bits (64), Expect = 1.8
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Frame = +3
Query: 180 PASGGIEKIHGKIFSFEKWQRARPEDYKEFKLKEDNVGFKMLQKLGWNEGQGL-----GV 344
P S G +K+H ++ KW +P + + +V L ++ +GL G
Sbjct: 185 PPSPGAQKLHSRL-KRSKWLHRKPTKFALKYILYTSVCHTDAYTLDGHDPEGLFPVVLGH 243
Query: 345 EGSGIVEPINK 377
EGSGIVE + K
Sbjct: 244 EGSGIVESVGK 254
>Z81074-6|CAE46669.1| 475|Caenorhabditis elegans Hypothetical
protein F32B6.8a protein.
Length = 475
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 25 AAGKHKYEYDSDEDTTDGTWEHKLRXKEMFATEKWADELTRQAAGK-HHIGDFLPP 189
+AGK +E +++ D +D W+ +++ E A+ A L AAGK H + +PP
Sbjct: 16 SAGKIGHEINNN-DVSDA-WDTRVKVDETLASASAAKVLAAHAAGKTHRDEEIMPP 69
>Z74045-4|CAA98554.2| 924|Caenorhabditis elegans Hypothetical
protein T27F2.2 protein.
Length = 924
Score = 28.3 bits (60), Expect = 5.5
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 573 P*TIDRPLCISKYYRKHCYIERN 641
P T+ P I YY +HC+I +N
Sbjct: 174 PKTVIEPQDIGSYYYRHCFISKN 196
>Z74032-11|CAA98469.2| 924|Caenorhabditis elegans Hypothetical
protein T27F2.2 protein.
Length = 924
Score = 28.3 bits (60), Expect = 5.5
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 573 P*TIDRPLCISKYYRKHCYIERN 641
P T+ P I YY +HC+I +N
Sbjct: 174 PKTVIEPQDIGSYYYRHCFISKN 196
>Z70310-2|CAA94367.1| 462|Caenorhabditis elegans Hypothetical
protein R11A8.2 protein.
Length = 462
Score = 28.3 bits (60), Expect = 5.5
Identities = 16/64 (25%), Positives = 28/64 (43%)
Frame = +3
Query: 240 RARPEDYKEFKLKEDNVGFKMLQKLGWNEGQGLGVEGSGIVEPINKAKQPVQNLGLGAST 419
R ED + ++ G +L+ W +G G+G + + + P LGLGA+
Sbjct: 141 RGDTEDADYSAIPIESFGLAILRGCNWKDGDGIGKNPQKVALKLPNRRPP--GLGLGATP 198
Query: 420 SDVV 431
+ V
Sbjct: 199 KNPV 202
>U00041-2|AAA50670.1| 128|Caenorhabditis elegans Hypothetical
protein C03B8.3 protein.
Length = 128
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +1
Query: 145 RQAAGKHHIGDFLPPEELKKFMEKYSALKNGKEPD 249
R+ A K+++ + PEEL+ F +YS L NG + D
Sbjct: 18 RRRAAKNNVIK-VRPEELRPFFNQYSVLPNGIQND 51
>Z81074-7|CAB03042.1| 495|Caenorhabditis elegans Hypothetical
protein F32B6.8b protein.
Length = 495
Score = 27.9 bits (59), Expect = 7.3
Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +1
Query: 46 EYDSDEDTTDGTWEHKLRXKEMFATEKWADELTRQAAGK-HHIGDFLPP 189
++ E++ W+ +++ E A+ A L AAGK H + +PP
Sbjct: 41 KFQDYENSVSDAWDTRVKVDETLASASAAKVLAAHAAGKTHRDEEIMPP 89
>AF022983-4|AAB69944.1| 387|Caenorhabditis elegans Hypothetical
protein R13D11.4 protein.
Length = 387
Score = 27.9 bits (59), Expect = 7.3
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = -1
Query: 219 IFFHEFFQFLRRQEISNVMFTS--SLPC*FIGPL 124
IFF FQ+ Q++SN F + +LPC I PL
Sbjct: 147 IFFRVDFQYYEWQKLSNCHFLTPRALPCRLIHPL 180
>AC024759-3|AAK68433.1| 355|Caenorhabditis elegans Hypothetical
protein Y37E11AR.3a protein.
Length = 355
Score = 27.9 bits (59), Expect = 7.3
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
Frame = +3
Query: 270 KLKEDNVGFKMLQKLG---WNEGQGLGVEGS 353
K+ + N K LG W EGQG+GV+GS
Sbjct: 155 KITDRNPQIKWFVPLGMKKWMEGQGIGVDGS 185
>AC024759-2|AAM97964.1| 376|Caenorhabditis elegans Hypothetical
protein Y37E11AR.3c protein.
Length = 376
Score = 27.9 bits (59), Expect = 7.3
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
Frame = +3
Query: 270 KLKEDNVGFKMLQKLG---WNEGQGLGVEGS 353
K+ + N K LG W EGQG+GV+GS
Sbjct: 176 KITDRNPQIKWFVPLGMKKWMEGQGIGVDGS 206
>AC024759-1|AAK73907.1| 376|Caenorhabditis elegans Hypothetical
protein Y37E11AR.3b protein.
Length = 376
Score = 27.9 bits (59), Expect = 7.3
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
Frame = +3
Query: 270 KLKEDNVGFKMLQKLG---WNEGQGLGVEGS 353
K+ + N K LG W EGQG+GV+GS
Sbjct: 176 KITDRNPQIKWFVPLGMKKWMEGQGIGVDGS 206
>AC006731-1|AAF60483.1| 4900|Caenorhabditis elegans Temporarily
assigned gene nameprotein 80 protein.
Length = 4900
Score = 27.9 bits (59), Expect = 7.3
Identities = 17/49 (34%), Positives = 21/49 (42%)
Frame = +1
Query: 4 HEAERLAAAGKHKYEYDSDEDTTDGTWEHKLRXKEMFATEKWADELTRQ 150
HE ER +A K YE D+D T L E E ELT++
Sbjct: 232 HEKERSSATSKADYERSFDQDVTYERSSPLLEPSEEPVMESKEPELTQE 280
>Z79755-7|CAB02103.1| 466|Caenorhabditis elegans Hypothetical
protein F43G9.10 protein.
Length = 466
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +1
Query: 7 EAERLAAAGKHKYEYDSDEDTTD--GTWEHKLRXKEMFATEK 126
+ + A + KY + ++EDTTD G W + F+T++
Sbjct: 407 QVKNFGKASRTKYTHLTEEDTTDHQGVWASTNQLNSQFSTKR 448
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,857,081
Number of Sequences: 27780
Number of extensions: 298471
Number of successful extensions: 890
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 890
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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