Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0799
         (652 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   8.8  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   8.8  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   8.8  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   8.8  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    21   8.8  

>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +2

Query: 578 NYPQWPNYQ*VGYI 619
           N P W  YQ V YI
Sbjct: 71  NRPWWERYQPVSYI 84


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +2

Query: 578 NYPQWPNYQ*VGYI 619
           N P W  YQ V YI
Sbjct: 72  NRPWWERYQPVSYI 85


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +2

Query: 578 NYPQWPNYQ*VGYI 619
           N P W  YQ V YI
Sbjct: 72  NRPWWERYQPVSYI 85


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +2

Query: 329 IKNISVLTQLLHTKCKQIYSQQ 394
           +KNIS L      +CK  Y Q+
Sbjct: 15  LKNISALNGAWRWECKSNYCQK 36


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +2

Query: 347 LTQLLHTKCKQIYSQQKN 400
           L   LHT+C +    QKN
Sbjct: 67  LPDALHTECSKCSETQKN 84


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,320
Number of Sequences: 336
Number of extensions: 2678
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)