Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0798
         (700 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    25   0.45 
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   7.3  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   9.7  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   9.7  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   9.7  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   9.7  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   9.7  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 25.4 bits (53), Expect = 0.45
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 619 PQIRRKLTTGFRVLLPRYTCRMF 687
           PQ+R  L  G+RV+L  Y    F
Sbjct: 452 PQVRNLLDNGYRVILSNYDALYF 474


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 217 IIYTYI*SKFKRTFQKFC 164
           I+Y  I SKF+  F K C
Sbjct: 351 ILYNIISSKFRSGFFKLC 368


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -1

Query: 220 LIIYTYI*SKFKRTFQKFCLKIPHIIKLSMFT 125
           L+ +T   SKF+ +  +FCL I     LS+FT
Sbjct: 302 LVTFTPDRSKFRPSSLRFCLNI-----LSIFT 328


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +2

Query: 233 HIT*YIHVVLLIN 271
           H T Y+H++ +IN
Sbjct: 158 HTTAYLHIITMIN 170


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +2

Query: 233 HIT*YIHVVLLIN 271
           H T Y+H++ +IN
Sbjct: 158 HTTAYLHIITMIN 170


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -1

Query: 220 LIIYTYI*SKFKRTFQKFCLKIPHIIKLSMFT 125
           L+ +T   SKF+ +  +FCL I     LS+FT
Sbjct: 27  LVTFTPDRSKFRPSSLRFCLNI-----LSIFT 53


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +2

Query: 233 HIT*YIHVVLLIN 271
           H T Y+H++ +IN
Sbjct: 158 HTTAYLHIITMIN 170


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,368
Number of Sequences: 336
Number of extensions: 3522
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)