Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0795
         (598 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094665-1|AAM11018.1|  322|Drosophila melanogaster AT28119p pro...    31   1.6  
AE014297-3685|AAF56377.1|  322|Drosophila melanogaster CG11780-P...    31   1.6  
AB091099-1|BAC22695.1|  322|Drosophila melanogaster xylosylprote...    31   1.6  
AY119657-1|AAM50311.1|  825|Drosophila melanogaster SD04373p pro...    29   4.8  
AF241794-1|AAF64048.1|  698|Drosophila melanogaster E protein tr...    29   4.8  
AE014298-2088|AAF48413.2|  825|Drosophila melanogaster CG32594-P...    29   4.8  

>AY094665-1|AAM11018.1|  322|Drosophila melanogaster AT28119p
           protein.
          Length = 322

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +2

Query: 11  HTLTIDGLPLTVLNVELICDRNAT 82
           H + ID +P+T+LN+ L CD N T
Sbjct: 282 HEMLIDQVPVTILNILLDCDVNKT 305


>AE014297-3685|AAF56377.1|  322|Drosophila melanogaster CG11780-PA
           protein.
          Length = 322

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +2

Query: 11  HTLTIDGLPLTVLNVELICDRNAT 82
           H + ID +P+T+LN+ L CD N T
Sbjct: 282 HEMLIDQVPVTILNILLDCDVNKT 305


>AB091099-1|BAC22695.1|  322|Drosophila melanogaster xylosylprotein
           beta4-galactosyltransferaseprotein.
          Length = 322

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +2

Query: 11  HTLTIDGLPLTVLNVELICDRNAT 82
           H + ID +P+T+LN+ L CD N T
Sbjct: 282 HEMLIDQVPVTILNILLDCDVNKT 305


>AY119657-1|AAM50311.1|  825|Drosophila melanogaster SD04373p
           protein.
          Length = 825

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = +3

Query: 6   RATPSPSTGCR*PSSTWSSSATGTRPRGV 92
           R+TPS +   R PS +   SAT T PR V
Sbjct: 704 RSTPSATPTSRPPSGSQEGSATATAPRAV 732


>AF241794-1|AAF64048.1|  698|Drosophila melanogaster E protein
           transcript B protein.
          Length = 698

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = +3

Query: 6   RATPSPSTGCR*PSSTWSSSATGTRPRGV 92
           R+TPS +   R PS +   SAT T PR V
Sbjct: 591 RSTPSATPTSRPPSGSQEGSATATAPRAV 619


>AE014298-2088|AAF48413.2|  825|Drosophila melanogaster CG32594-PC,
           isoform C protein.
          Length = 825

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = +3

Query: 6   RATPSPSTGCR*PSSTWSSSATGTRPRGV 92
           R+TPS +   R PS +   SAT T PR V
Sbjct: 704 RSTPSATPTSRPPSGSQEGSATATAPRAV 732


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,435,440
Number of Sequences: 53049
Number of extensions: 318273
Number of successful extensions: 991
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 964
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 991
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2420893683
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)